Gene Pfl01_5176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5176 
Symbol 
ID3716766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5821270 
End bp5822325 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content61% 
IMG OID 
Productbiotin synthase 
Protein accessionYP_350904 
Protein GI77461397 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.00545091 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.142665 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCA GCACCACTGC CACCCTGCGT CACGACTGGA CTTTGGCCGA AGTCAAAGCA 
CTGTTCGTTC AGCCATTCAA CGACTTGCTG TTCCAGGCGC AGACGGTGCA CCGCGCGCAT
TTCGACGCCA ACCGCGTCCA GGTTTCCACT CTGCTGTCGA TCAAGACCGG CGCCTGCCCG
GAAGATTGCA AATATTGTCC GCAGTCCGGT CACTACAACA CCGGGCTGGA AAAAGAAAAG
CTCATGGAAG TGCAGAAAGT CCTCGAAGAG GCTGCACGCG CCAAGGCCAT CGGTTCGACC
CGTTTCTGCA TGGGCGCGGC GTGGAAGCAC CCGTCGGCCA AGGACATGCC TTATGTGCTG
AAGATGGTCG AAGGCGTGAA GGCCATGGGC CTGGAAACCT GCATGACCCT CGGTCGTCTC
GATCAGGATC AGACCGAGGC ACTGGCCAAG GCCGGGCTCG ACTACTACAA CCACAACCTC
GACACCTCGC CGGAGTTCTA CGGCAGCATC ATCACCACCC GCACCTATGC CGAGCGTCTG
CAGACCCTGG CCTATGTGCG CGATGCGGGG ATGAAAATCT GCTCCGGCGG CATCCTCGGT
ATGGGCGAGT CCCTCGATGA CCGCGCGAAC CTGCTGATCC AGTTGGCCAA CCTGCCGGAG
CACCCGGAAT CGGTGCCGAT CAACATGCTG GTGAAAGTCG CCGGTACGCC GCTGGAAAAC
GCTGACGACG TCGATCCGTT CGACTTCATC CGCATGCTCG CCGTGGCGCG GATCCTGATG
CCGCAATCCC ACGTGCGCCT GTCCGCCGGC CGCGAAGCGA TGAACGAGCA GATGCAGGCC
CTGGCGTTCT TCGCCGGCGC CAACTCGATC TTCTACGGCG ACAAACTGCT GACCACCGCC
AACCCGCAGG CCGACAAGGA CATGCAGTTG TTCGCACGTC TGGGCATTCA GCCGGAAGCA
CGCGAAGAGC ATGCTGACGA AGTACATCAG GCTGCCATCG AACAGGCGCT GGTGGAGCAG
AAGAGCAGCG AGCAGTTCTA CAACGCGGCG GTCTGA
 
Protein sequence
MSASTTATLR HDWTLAEVKA LFVQPFNDLL FQAQTVHRAH FDANRVQVST LLSIKTGACP 
EDCKYCPQSG HYNTGLEKEK LMEVQKVLEE AARAKAIGST RFCMGAAWKH PSAKDMPYVL
KMVEGVKAMG LETCMTLGRL DQDQTEALAK AGLDYYNHNL DTSPEFYGSI ITTRTYAERL
QTLAYVRDAG MKICSGGILG MGESLDDRAN LLIQLANLPE HPESVPINML VKVAGTPLEN
ADDVDPFDFI RMLAVARILM PQSHVRLSAG REAMNEQMQA LAFFAGANSI FYGDKLLTTA
NPQADKDMQL FARLGIQPEA REEHADEVHQ AAIEQALVEQ KSSEQFYNAA V