Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5176 |
Symbol | |
ID | 3716766 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 5821270 |
End bp | 5822325 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | biotin synthase |
Protein accession | YP_350904 |
Protein GI | 77461397 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.00545091 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.142665 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGCCA GCACCACTGC CACCCTGCGT CACGACTGGA CTTTGGCCGA AGTCAAAGCA CTGTTCGTTC AGCCATTCAA CGACTTGCTG TTCCAGGCGC AGACGGTGCA CCGCGCGCAT TTCGACGCCA ACCGCGTCCA GGTTTCCACT CTGCTGTCGA TCAAGACCGG CGCCTGCCCG GAAGATTGCA AATATTGTCC GCAGTCCGGT CACTACAACA CCGGGCTGGA AAAAGAAAAG CTCATGGAAG TGCAGAAAGT CCTCGAAGAG GCTGCACGCG CCAAGGCCAT CGGTTCGACC CGTTTCTGCA TGGGCGCGGC GTGGAAGCAC CCGTCGGCCA AGGACATGCC TTATGTGCTG AAGATGGTCG AAGGCGTGAA GGCCATGGGC CTGGAAACCT GCATGACCCT CGGTCGTCTC GATCAGGATC AGACCGAGGC ACTGGCCAAG GCCGGGCTCG ACTACTACAA CCACAACCTC GACACCTCGC CGGAGTTCTA CGGCAGCATC ATCACCACCC GCACCTATGC CGAGCGTCTG CAGACCCTGG CCTATGTGCG CGATGCGGGG ATGAAAATCT GCTCCGGCGG CATCCTCGGT ATGGGCGAGT CCCTCGATGA CCGCGCGAAC CTGCTGATCC AGTTGGCCAA CCTGCCGGAG CACCCGGAAT CGGTGCCGAT CAACATGCTG GTGAAAGTCG CCGGTACGCC GCTGGAAAAC GCTGACGACG TCGATCCGTT CGACTTCATC CGCATGCTCG CCGTGGCGCG GATCCTGATG CCGCAATCCC ACGTGCGCCT GTCCGCCGGC CGCGAAGCGA TGAACGAGCA GATGCAGGCC CTGGCGTTCT TCGCCGGCGC CAACTCGATC TTCTACGGCG ACAAACTGCT GACCACCGCC AACCCGCAGG CCGACAAGGA CATGCAGTTG TTCGCACGTC TGGGCATTCA GCCGGAAGCA CGCGAAGAGC ATGCTGACGA AGTACATCAG GCTGCCATCG AACAGGCGCT GGTGGAGCAG AAGAGCAGCG AGCAGTTCTA CAACGCGGCG GTCTGA
|
Protein sequence | MSASTTATLR HDWTLAEVKA LFVQPFNDLL FQAQTVHRAH FDANRVQVST LLSIKTGACP EDCKYCPQSG HYNTGLEKEK LMEVQKVLEE AARAKAIGST RFCMGAAWKH PSAKDMPYVL KMVEGVKAMG LETCMTLGRL DQDQTEALAK AGLDYYNHNL DTSPEFYGSI ITTRTYAERL QTLAYVRDAG MKICSGGILG MGESLDDRAN LLIQLANLPE HPESVPINML VKVAGTPLEN ADDVDPFDFI RMLAVARILM PQSHVRLSAG REAMNEQMQA LAFFAGANSI FYGDKLLTTA NPQADKDMQL FARLGIQPEA REEHADEVHQ AAIEQALVEQ KSSEQFYNAA V
|
| |