Gene Pfl01_5109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5109 
Symbol 
ID3716449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5742343 
End bp5743137 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content54% 
IMG OID 
ProductS-adenosylmethionine decarboxylase 
Protein accessionYP_350837 
Protein GI77461330 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.720307 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAAGCA AACTCAAGCT CCACGGGTTC AATAACCTGA CAAAGACCTT GAGCTTCAAC 
ATCTATGACA TCTGCTACGC GGAAACCCCG CAAGACCAGC AGGCTTACGT CGAGTACATC
AATCAAGAGT ACAACGCCGA ACGCCTGACG CAGATCCTCA CGGAAGTTGT CGAAATCATT
GGTGCCAACA TTCTGAACAT TGCGAGTCAG AACTATGAGC CTCAGGGTGC CAGCGTCACG
ATTCTGATCT CGGAAGAGCC GGTGACCCCG ACCGAAAGCC AGATCGAAGA GTCCCCGGGC
CCGTTGCCCG AAATCATCCT GGCCCACCTC GACAAGAGCC ACATCACGGT GCACACCTAC
CCGGAAATCC ATCCGGACGC CGGTATTGCG ACTTTCCGTG TGGACATCGA CGTGTCGACC
TGTGGTGTCA TTTCACCGCT CAAAGCGCTC AACTTCCTCA TTCACCAGTT CGATTCGGAC
ATCGTGACCG TGGATTACCG TGTGCGCGGC TTCACCCGTG ACGTTGAAGG CAACAAGCAC
TTCATCGACC ACGAGATCAA CTCGATCCAG AACTACCTCT CCGAAGACAC CCGCGACGCG
TACCAGATGA CCGACGTGAA CGTGTACCAG GAAAACCTGT TCCACACCAA AATGCTGTTG
AAGAACTTCG AACTGGACAA CTACCTGTTC GGCGATGCCA CCAGCAACCT GTCGTCCGAG
CAACGTGCTC AGGTGACCGA GCGTGTGAAA CACGAAATGC TGGAAATCTT CTACGCGCGC
AATATGCCGA GCTAA
 
Protein sequence
MKSKLKLHGF NNLTKTLSFN IYDICYAETP QDQQAYVEYI NQEYNAERLT QILTEVVEII 
GANILNIASQ NYEPQGASVT ILISEEPVTP TESQIEESPG PLPEIILAHL DKSHITVHTY
PEIHPDAGIA TFRVDIDVST CGVISPLKAL NFLIHQFDSD IVTVDYRVRG FTRDVEGNKH
FIDHEINSIQ NYLSEDTRDA YQMTDVNVYQ ENLFHTKMLL KNFELDNYLF GDATSNLSSE
QRAQVTERVK HEMLEIFYAR NMPS