Gene Pfl01_5044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5044 
Symbol 
ID3713700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5680752 
End bp5681450 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content64% 
IMG OID 
Productphage shock protein A, PspA 
Protein accessionYP_350772 
Protein GI77461265 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0169336 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCAGT CCATCTGGAG CAAGTTGTTC ACCGCGCTGC GCGGCGGCGC CAACGAAGTC 
GGCGAAGCGA TCGCCGACCA ACAGGCCCTG CGCATACTCG ATCAGGAAAT CCGTGACGCC
GACAGCGCGC TGTCCAATGC CCGTCGCGAA CTGGTCACCA TCATGGCCAA GCACAAACTC
TCCGCCGACC GCGTGAGCGA GTACGAAGCC AAGATCGGGG ACCTGGAAGC CAAGGCCGTT
TCCGCCCTGA ACGCCGGCCG TGAAGACCTG GCGCTGGAAG TGGCCGAAGC GATTTCGACC
CTGACCAACG ACCTGGGCGT CGAGAAAAAG CAGACCGACG AGTTCGGCAC CTACGCCGAC
AACATGCGCA AGGACATCAA CAAGGCCGAA GCGCGGATCA AGAGCCTGCG CCAGCAAGTG
GACATGGCCA AGGCCCGTGA GAGCGTGCAG AAAGCGCAGG TCAGCGCCTC GATCGCCAGC
GGCGGCGCCA ACGGCAAGCT GGAAACCGCT GTCGGTACTC TGAACCGTCT GCAAGCCAAG
CAGCAGCAAC GCGCTGCCGA GCTGAGCGCT GCCGACGAGC TGGCCGATGC TTCGACCGGC
AACGACCTGG ATCGCAAGCT GCGCGAAGCC GGCATCACGC CGAACGAAGG CAGCGCCAAC
GCCATCCTCG AGCGTCTGAA GCAGAAGTCC GCCCAGTAA
 
Protein sequence
MTQSIWSKLF TALRGGANEV GEAIADQQAL RILDQEIRDA DSALSNARRE LVTIMAKHKL 
SADRVSEYEA KIGDLEAKAV SALNAGREDL ALEVAEAIST LTNDLGVEKK QTDEFGTYAD
NMRKDINKAE ARIKSLRQQV DMAKARESVQ KAQVSASIAS GGANGKLETA VGTLNRLQAK
QQQRAAELSA ADELADASTG NDLDRKLREA GITPNEGSAN AILERLKQKS AQ