Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5044 |
Symbol | |
ID | 3713700 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 5680752 |
End bp | 5681450 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | phage shock protein A, PspA |
Protein accession | YP_350772 |
Protein GI | 77461265 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0169336 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCAGT CCATCTGGAG CAAGTTGTTC ACCGCGCTGC GCGGCGGCGC CAACGAAGTC GGCGAAGCGA TCGCCGACCA ACAGGCCCTG CGCATACTCG ATCAGGAAAT CCGTGACGCC GACAGCGCGC TGTCCAATGC CCGTCGCGAA CTGGTCACCA TCATGGCCAA GCACAAACTC TCCGCCGACC GCGTGAGCGA GTACGAAGCC AAGATCGGGG ACCTGGAAGC CAAGGCCGTT TCCGCCCTGA ACGCCGGCCG TGAAGACCTG GCGCTGGAAG TGGCCGAAGC GATTTCGACC CTGACCAACG ACCTGGGCGT CGAGAAAAAG CAGACCGACG AGTTCGGCAC CTACGCCGAC AACATGCGCA AGGACATCAA CAAGGCCGAA GCGCGGATCA AGAGCCTGCG CCAGCAAGTG GACATGGCCA AGGCCCGTGA GAGCGTGCAG AAAGCGCAGG TCAGCGCCTC GATCGCCAGC GGCGGCGCCA ACGGCAAGCT GGAAACCGCT GTCGGTACTC TGAACCGTCT GCAAGCCAAG CAGCAGCAAC GCGCTGCCGA GCTGAGCGCT GCCGACGAGC TGGCCGATGC TTCGACCGGC AACGACCTGG ATCGCAAGCT GCGCGAAGCC GGCATCACGC CGAACGAAGG CAGCGCCAAC GCCATCCTCG AGCGTCTGAA GCAGAAGTCC GCCCAGTAA
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Protein sequence | MTQSIWSKLF TALRGGANEV GEAIADQQAL RILDQEIRDA DSALSNARRE LVTIMAKHKL SADRVSEYEA KIGDLEAKAV SALNAGREDL ALEVAEAIST LTNDLGVEKK QTDEFGTYAD NMRKDINKAE ARIKSLRQQV DMAKARESVQ KAQVSASIAS GGANGKLETA VGTLNRLQAK QQQRAAELSA ADELADASTG NDLDRKLREA GITPNEGSAN AILERLKQKS AQ
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