Gene Pfl01_5023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5023 
Symbol 
ID3713757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5656837 
End bp5657709 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content62% 
IMG OID 
Productthioredoxin 
Protein accessionYP_350751 
Protein GI77461244 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.929168 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.995231 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCAGC AAACGCCGTA CATCTTCGAC GCCACGACGG CCGACTTCGA CCAGTCGGTG 
ATCGAGGCTT CCTTTCAAAA ACCGGTGCTG GTGGATTTCT GGGCCGAATG GTGTGCGCCG
TGCAAGGCGC TGATGCCGAT GCTGCAAGGC ATCGCCGAAA GCTATCAGGG TGAGTTGCTG
CTGGCCAAGG TCAATTGCGA TATCGAGCAG GACATCGTCG CCCGCTTCGG CATCCGTAGC
CTGCCGACCG TGGTGCTGTT CAAGGACGGT CAACCGGTGG ATGGCTTTGC CGGTGCACAA
CCGGAGTCCG CCGTACGCGC CCTGCTCGAA CCCCATGTGC AGATGCCGGC GCCGTCCGCC
GCCGATCCGT TCGAACAGGC TCAGGCACTG TTCGACGAGG GCCGTTACGC CGACGCGGAA
GCAAAGCTGG TCGTGCTGTT GGGCGAGGAC AATACCAACG CCAAGGCGCT GATTCTTTAC
GCTCGTTGCC TGACCGAACG CGGTGAGCTG GGCGAAGCGC AAACCGTGCT CGACGCGGTC
AAGAGCGACG AACACAAGGC TGCACTCGCC GGTGCCAAGG CGCAGATCAA GTTCCTCGGC
CTGGCCCGTG ACCTGCCGGA CGCCGCCGAC CTGAAGAGCC GTCTGGCGCA AAACCCGCAG
GACGATGAAG CGGTGTATCA ACTGGCGATC CAGCAACTGG CCCGTCAGCA ATACGAAGCG
GCGCTGGACG CATTGCTCAA GCTGTTCATC CGCAACCGCA GCTACGGCGA AGGCCTGCCG
CACAAGACCT TGCTGCAAGT GTTCGAACTG CTGGGCAACG ATCACCCGCT GGTGACCGCT
TACCGGCGCA AGGTGTTTGC GGCGCTGTAC TAA
 
Protein sequence
MSQQTPYIFD ATTADFDQSV IEASFQKPVL VDFWAEWCAP CKALMPMLQG IAESYQGELL 
LAKVNCDIEQ DIVARFGIRS LPTVVLFKDG QPVDGFAGAQ PESAVRALLE PHVQMPAPSA
ADPFEQAQAL FDEGRYADAE AKLVVLLGED NTNAKALILY ARCLTERGEL GEAQTVLDAV
KSDEHKAALA GAKAQIKFLG LARDLPDAAD LKSRLAQNPQ DDEAVYQLAI QQLARQQYEA
ALDALLKLFI RNRSYGEGLP HKTLLQVFEL LGNDHPLVTA YRRKVFAALY