Gene Pfl01_4998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4998 
Symbol 
ID3714664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5630014 
End bp5630826 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content62% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_350726 
Protein GI77461219 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.393051 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACTCC GTTATCCACA GGTCTTGCTG TTGCTCTGCG TATTTACCGC GGTTTCGCCG 
GTGATCGCCG CTGACGGCGT CAAACTCGAC ACCCCGGTCG GCGGCTGGCG CAGCGGCGCG
CCCGAAGGCG AGGGCGAAAG CTTTCGCCAG ACCGTCAACT ACCCGGCCTC CTCGGTGAGC
ACCCCGATCG GCCAGGCCAA CACCGCCCGA ATCAGCGGCG AAATCAAAGC CACACCGAAA
AACAAAGAGC CCGGACGCCT GATCGTCAAT GGCGTCAGCA TGCCGCTGAA AATCGACGAC
AGCGGCCGCT TCGACCGCCC GTTCTCCTTT CCCAACGGCA GCAACAGCGT CGAAGTCCGC
AGCCCGGACG GCCAGCAACG GCACCGCACG CAGTTCCTCA ACACCAGTGG CGGCGCTACT
CCGGCAAAAC TGCGGGTGTT GCTGGCGTGG GACAGCGATG GCACTGACCT CGACCTGCAC
TTGGTCACGC CTGATGGCGC GCACATCTGG TATGGCGATC GCGTTGCCCC CAATGGCGCT
GCTCTGGATG TCGACGTGAC CACCGGATAC GGCCCGGAAA TCTTCGCCAT GCCGGCGCCG
ATCAAGGGGC AGTATCTGGT GTATGTGAAT TATTTTGGCG GTGGGTATCG CGGAGATGAT
GAGGGAGGGG AAGAGGCGGT GCAGCCGTTG ACAACCGCGC AGGTGACGGT GATTACGGAG
GAGGGGACGC CTAGCGAGAA GATGGAAACT TTCATCGTGC CGATGCGGGC GGTGGGGGAA
TTGACGTTGG TGAAGTCGTT TAGCTATCCG TGA
 
Protein sequence
MTLRYPQVLL LLCVFTAVSP VIAADGVKLD TPVGGWRSGA PEGEGESFRQ TVNYPASSVS 
TPIGQANTAR ISGEIKATPK NKEPGRLIVN GVSMPLKIDD SGRFDRPFSF PNGSNSVEVR
SPDGQQRHRT QFLNTSGGAT PAKLRVLLAW DSDGTDLDLH LVTPDGAHIW YGDRVAPNGA
ALDVDVTTGY GPEIFAMPAP IKGQYLVYVN YFGGGYRGDD EGGEEAVQPL TTAQVTVITE
EGTPSEKMET FIVPMRAVGE LTLVKSFSYP