Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4923 |
Symbol | |
ID | 3714045 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 5546543 |
End bp | 5549473 |
Gene Length | 2931 bp |
Protein Length | 976 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_350651 |
Protein GI | 77461144 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.668191 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCTTT CGCAATACAG CAAGGGACTG CGTGCCAGCG AAATTACCCC CCTCCTGCAG TTCTTCCTCT CAGGTATCCT CGCCGGCGAG GCCTGGGCCA TCGGTCGGAT CATTGGGGTT CTGTTAAACA AACATCTCGT GTCGTTGCAG CTGAATTTCT GGATCCTCGT GCTTACGACA TTGGCTGTCG TCGCCTCATG TCTGATCTAT GCCACCAGCC GAGGCGCCCT CGATACATCG TGCAAACTGA TCAAAAGCTG CCGGCTCGAC TTGCTGCTCG TCACGCTGCT CGGTTTTTAC CTTTCGTTCA GCAGCGACGG GTTCGGCAAC GAATTCTATG CAAAGCACCT GGAAAAGCTG AATTTCTCTC AACTCGCCTG CATGTCTGCT TCCCCAGTGC TCATCGCGTG GATGGCAATG ATCAGAGCCT TCCTGCAGAC GTTCAAGAAA GGCAAATCCC ACACCTATTT CATTAGCGAT CGTGTGATTG AGGAGTCTGA AGAGGATTTG CTGAACGTCA AGGAACAGGC CGACATCTTT GCCGAGCGTG TGCTCAATGG AGGCTCATCC GAAAGTCTGG TGTTCGGCAT CGATGCACCT TGGGGTGCGG GAAAGTCGAG TTTCGTGAAG CTCTGCTGTA ACTACTGGGA AAAGAAGGAG GGACAAAGCA TCATCGTTCA TCACTTTGAG CCCTTGCGCT ATGAGGATGG CACTGACCTA ACAGAGAAAT TCGTCGACGA TCTCATCAGC ACCATTCAAC AACATGTTTT CGCGCCGTCG TTACGCCCGC TATTCAAGCG TTACGAAAAT CTGGTCAAGG ACAAGAAGAA AACTTCTTTG CTTGATATAA AAACGACGTT CTCTCTCAAC AATGACTCGA TCGACGCTAC CCTCGAGGAA ATGGAGTATG TCTTAAACAA CATCAACACC AGAATAATTG TAATCGTTGA TGATCTCGAC CGAATGCACT GGTCATCGGC CAAAAGCATT TTGTTTTCAA TAAAACGCAG CTTCAGGCTT CCCAACATTA GCTACGTCAT CTGCTATGAC ACCTCAAAGA TAAATGTCAC ACCGGAAAAC CCAGACTCCG AAAAGACCCA GGAATTCCTC GAAAAATTTA TTAACATCAA AACGAGTATC TTCCTCGGCG CCCAAGACCT CACGGCCTTT GTGAAACGCT ACTTTGATAG CGTACTGAGC AAAACATTGA ACATTTCCAG TGACGGCGCT AAAGAACTCA ATCTGCTATC CCGTGAACTG ATCAATCTTT TCAACGACAA GGATTTTCCT CATTACACAC CTTTCATCGG TGATATTCGA AAAATCAAGC GACTCATCAA CACACTGGTA CTACTGGACA TCGACAAAGT CGACTTCCAC AATAATGATT TCAACAAACG TGACCTCCTT CATCTGATCC TGATCCTCAT CTACTCGCCA TCAACATTCC GGAAGATCTA TGAGAGCGAG ACCAGCGGAA AGTCCGGCAC GTTCAGCTGG ATTCAACAAG GCAACAGTCT AAAAAACTCT GAGTTTTACG ATTCCTTCAA AGCGAAGCTT TCCGAGACCT CAAGCATAAA GTTCCTGCTA TCCAAGCTGT TCGACGCGCC GCCTGAGAGT GCCGACCACT TTCCAGAATC CGAGAAACGC TCAAGGGCAG TATTTCAGGA CAAGCATCGA CCTCTGGAAA AGCACCTCCA TCTCATCGCC AAGCTTTCCA GACCTATTTC ATGGGAATCC CATCGATTTC TCCTGAACAA GAAAGACGAA CTGTTCAAGA CCAACGCGAT CAAGCCCTAT CTCGATCAAA TATCCGAGTT TCCACCTTTG GATAATGAGT CAGGGCTACA TGAATTCTGG CGAATCGTGA CAAGCCATAG CGGCGCTCTT GAAACAGACA AAGCCGTCAC GATCATTGAG TACCTGATCG ATACGTTGCC CAACTACTCC CTGCTCAACG GTGATGAACT CAATGAGTTT CGCAGCACCG CCGTCCGGTA TATCGCGAAG CTCCTAGACG AGAACATCAC TAGTTTGGAA AAAAGCTCCG TTCCACATCT TTCTCCGGCG GAGTCCGCCA TCATCAAACT CGTGTATGGG GATGACAATG GAAGCATCGG GATCATCTCG AAGCTGGCCC CTCCAGAGCG CGGCGCGTTG GGCCTGCATG ACCTGATGAC ATTTCGGCAC CACTGCACGA TTAAGACCAA GCGCGAACGA CTTTGGCAAG CCCTTATACT GCACGGTAAT GAAAGGACTT TATACTCAGA TCGTGTAGAA GAGACGAAGG ACCAGGCGCG AGAGATCAGT CAGTTCATAT TCGGCCTGTT CAGGCGACAA TACATCGAAA GCGGTAAGAA CATTCTCGCC GAGATCGATT CCATAAATTC AATCGCCCTC TTCGGGCGCT ATAAAACCAT CCTCACCGAA TCAAAAGACA CCAAAATCTG GGAAGAAAAA GTCAATCGCA AGAAGCACGA AATAAAGGAC ACCATCACAT CCAAACTTGG GAACTTAATC ATCGATGATT TTGGGGTCTT CGACGAAAGC GGCCTTGAAG ACAACCATGG CATCTCCAAA GCTTTTTCGG AGTATCTGTT TTCGATTTGC TTCGACCCGA AAAGCCCCAA CGGCCTACTT CATTTCGCCG AATATCTATT GAACTTCGCA AACAACACGC TCCAAGACAT CAACAATCCA GAGGATAAAT CCGGTCTCTC GGCTCTCTTA AACAACCTCG ACAATGAACA GCTTGAAAAT TATTGGAAAA ACAACCATGA GGCCATAAAA ACCAGAACGG ACGAAGAGAA AGACAGGGTG ATCTACAAGA CCTACTCGCA ACCGACCTTC CATAGTGACC TGCGACTTGC TTTCCGCGCG CTGGACAGCC TGTTCCTGCC CGAGAAAACC GCCGGAGGAG AAACTCTGTA A
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Protein sequence | MRLSQYSKGL RASEITPLLQ FFLSGILAGE AWAIGRIIGV LLNKHLVSLQ LNFWILVLTT LAVVASCLIY ATSRGALDTS CKLIKSCRLD LLLVTLLGFY LSFSSDGFGN EFYAKHLEKL NFSQLACMSA SPVLIAWMAM IRAFLQTFKK GKSHTYFISD RVIEESEEDL LNVKEQADIF AERVLNGGSS ESLVFGIDAP WGAGKSSFVK LCCNYWEKKE GQSIIVHHFE PLRYEDGTDL TEKFVDDLIS TIQQHVFAPS LRPLFKRYEN LVKDKKKTSL LDIKTTFSLN NDSIDATLEE MEYVLNNINT RIIVIVDDLD RMHWSSAKSI LFSIKRSFRL PNISYVICYD TSKINVTPEN PDSEKTQEFL EKFINIKTSI FLGAQDLTAF VKRYFDSVLS KTLNISSDGA KELNLLSREL INLFNDKDFP HYTPFIGDIR KIKRLINTLV LLDIDKVDFH NNDFNKRDLL HLILILIYSP STFRKIYESE TSGKSGTFSW IQQGNSLKNS EFYDSFKAKL SETSSIKFLL SKLFDAPPES ADHFPESEKR SRAVFQDKHR PLEKHLHLIA KLSRPISWES HRFLLNKKDE LFKTNAIKPY LDQISEFPPL DNESGLHEFW RIVTSHSGAL ETDKAVTIIE YLIDTLPNYS LLNGDELNEF RSTAVRYIAK LLDENITSLE KSSVPHLSPA ESAIIKLVYG DDNGSIGIIS KLAPPERGAL GLHDLMTFRH HCTIKTKRER LWQALILHGN ERTLYSDRVE ETKDQAREIS QFIFGLFRRQ YIESGKNILA EIDSINSIAL FGRYKTILTE SKDTKIWEEK VNRKKHEIKD TITSKLGNLI IDDFGVFDES GLEDNHGISK AFSEYLFSIC FDPKSPNGLL HFAEYLLNFA NNTLQDINNP EDKSGLSALL NNLDNEQLEN YWKNNHEAIK TRTDEEKDRV IYKTYSQPTF HSDLRLAFRA LDSLFLPEKT AGGETL
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