Gene Pfl01_4923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4923 
Symbol 
ID3714045 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5546543 
End bp5549473 
Gene Length2931 bp 
Protein Length976 aa 
Translation table11 
GC content48% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_350651 
Protein GI77461144 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.668191 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCTTT CGCAATACAG CAAGGGACTG CGTGCCAGCG AAATTACCCC CCTCCTGCAG 
TTCTTCCTCT CAGGTATCCT CGCCGGCGAG GCCTGGGCCA TCGGTCGGAT CATTGGGGTT
CTGTTAAACA AACATCTCGT GTCGTTGCAG CTGAATTTCT GGATCCTCGT GCTTACGACA
TTGGCTGTCG TCGCCTCATG TCTGATCTAT GCCACCAGCC GAGGCGCCCT CGATACATCG
TGCAAACTGA TCAAAAGCTG CCGGCTCGAC TTGCTGCTCG TCACGCTGCT CGGTTTTTAC
CTTTCGTTCA GCAGCGACGG GTTCGGCAAC GAATTCTATG CAAAGCACCT GGAAAAGCTG
AATTTCTCTC AACTCGCCTG CATGTCTGCT TCCCCAGTGC TCATCGCGTG GATGGCAATG
ATCAGAGCCT TCCTGCAGAC GTTCAAGAAA GGCAAATCCC ACACCTATTT CATTAGCGAT
CGTGTGATTG AGGAGTCTGA AGAGGATTTG CTGAACGTCA AGGAACAGGC CGACATCTTT
GCCGAGCGTG TGCTCAATGG AGGCTCATCC GAAAGTCTGG TGTTCGGCAT CGATGCACCT
TGGGGTGCGG GAAAGTCGAG TTTCGTGAAG CTCTGCTGTA ACTACTGGGA AAAGAAGGAG
GGACAAAGCA TCATCGTTCA TCACTTTGAG CCCTTGCGCT ATGAGGATGG CACTGACCTA
ACAGAGAAAT TCGTCGACGA TCTCATCAGC ACCATTCAAC AACATGTTTT CGCGCCGTCG
TTACGCCCGC TATTCAAGCG TTACGAAAAT CTGGTCAAGG ACAAGAAGAA AACTTCTTTG
CTTGATATAA AAACGACGTT CTCTCTCAAC AATGACTCGA TCGACGCTAC CCTCGAGGAA
ATGGAGTATG TCTTAAACAA CATCAACACC AGAATAATTG TAATCGTTGA TGATCTCGAC
CGAATGCACT GGTCATCGGC CAAAAGCATT TTGTTTTCAA TAAAACGCAG CTTCAGGCTT
CCCAACATTA GCTACGTCAT CTGCTATGAC ACCTCAAAGA TAAATGTCAC ACCGGAAAAC
CCAGACTCCG AAAAGACCCA GGAATTCCTC GAAAAATTTA TTAACATCAA AACGAGTATC
TTCCTCGGCG CCCAAGACCT CACGGCCTTT GTGAAACGCT ACTTTGATAG CGTACTGAGC
AAAACATTGA ACATTTCCAG TGACGGCGCT AAAGAACTCA ATCTGCTATC CCGTGAACTG
ATCAATCTTT TCAACGACAA GGATTTTCCT CATTACACAC CTTTCATCGG TGATATTCGA
AAAATCAAGC GACTCATCAA CACACTGGTA CTACTGGACA TCGACAAAGT CGACTTCCAC
AATAATGATT TCAACAAACG TGACCTCCTT CATCTGATCC TGATCCTCAT CTACTCGCCA
TCAACATTCC GGAAGATCTA TGAGAGCGAG ACCAGCGGAA AGTCCGGCAC GTTCAGCTGG
ATTCAACAAG GCAACAGTCT AAAAAACTCT GAGTTTTACG ATTCCTTCAA AGCGAAGCTT
TCCGAGACCT CAAGCATAAA GTTCCTGCTA TCCAAGCTGT TCGACGCGCC GCCTGAGAGT
GCCGACCACT TTCCAGAATC CGAGAAACGC TCAAGGGCAG TATTTCAGGA CAAGCATCGA
CCTCTGGAAA AGCACCTCCA TCTCATCGCC AAGCTTTCCA GACCTATTTC ATGGGAATCC
CATCGATTTC TCCTGAACAA GAAAGACGAA CTGTTCAAGA CCAACGCGAT CAAGCCCTAT
CTCGATCAAA TATCCGAGTT TCCACCTTTG GATAATGAGT CAGGGCTACA TGAATTCTGG
CGAATCGTGA CAAGCCATAG CGGCGCTCTT GAAACAGACA AAGCCGTCAC GATCATTGAG
TACCTGATCG ATACGTTGCC CAACTACTCC CTGCTCAACG GTGATGAACT CAATGAGTTT
CGCAGCACCG CCGTCCGGTA TATCGCGAAG CTCCTAGACG AGAACATCAC TAGTTTGGAA
AAAAGCTCCG TTCCACATCT TTCTCCGGCG GAGTCCGCCA TCATCAAACT CGTGTATGGG
GATGACAATG GAAGCATCGG GATCATCTCG AAGCTGGCCC CTCCAGAGCG CGGCGCGTTG
GGCCTGCATG ACCTGATGAC ATTTCGGCAC CACTGCACGA TTAAGACCAA GCGCGAACGA
CTTTGGCAAG CCCTTATACT GCACGGTAAT GAAAGGACTT TATACTCAGA TCGTGTAGAA
GAGACGAAGG ACCAGGCGCG AGAGATCAGT CAGTTCATAT TCGGCCTGTT CAGGCGACAA
TACATCGAAA GCGGTAAGAA CATTCTCGCC GAGATCGATT CCATAAATTC AATCGCCCTC
TTCGGGCGCT ATAAAACCAT CCTCACCGAA TCAAAAGACA CCAAAATCTG GGAAGAAAAA
GTCAATCGCA AGAAGCACGA AATAAAGGAC ACCATCACAT CCAAACTTGG GAACTTAATC
ATCGATGATT TTGGGGTCTT CGACGAAAGC GGCCTTGAAG ACAACCATGG CATCTCCAAA
GCTTTTTCGG AGTATCTGTT TTCGATTTGC TTCGACCCGA AAAGCCCCAA CGGCCTACTT
CATTTCGCCG AATATCTATT GAACTTCGCA AACAACACGC TCCAAGACAT CAACAATCCA
GAGGATAAAT CCGGTCTCTC GGCTCTCTTA AACAACCTCG ACAATGAACA GCTTGAAAAT
TATTGGAAAA ACAACCATGA GGCCATAAAA ACCAGAACGG ACGAAGAGAA AGACAGGGTG
ATCTACAAGA CCTACTCGCA ACCGACCTTC CATAGTGACC TGCGACTTGC TTTCCGCGCG
CTGGACAGCC TGTTCCTGCC CGAGAAAACC GCCGGAGGAG AAACTCTGTA A
 
Protein sequence
MRLSQYSKGL RASEITPLLQ FFLSGILAGE AWAIGRIIGV LLNKHLVSLQ LNFWILVLTT 
LAVVASCLIY ATSRGALDTS CKLIKSCRLD LLLVTLLGFY LSFSSDGFGN EFYAKHLEKL
NFSQLACMSA SPVLIAWMAM IRAFLQTFKK GKSHTYFISD RVIEESEEDL LNVKEQADIF
AERVLNGGSS ESLVFGIDAP WGAGKSSFVK LCCNYWEKKE GQSIIVHHFE PLRYEDGTDL
TEKFVDDLIS TIQQHVFAPS LRPLFKRYEN LVKDKKKTSL LDIKTTFSLN NDSIDATLEE
MEYVLNNINT RIIVIVDDLD RMHWSSAKSI LFSIKRSFRL PNISYVICYD TSKINVTPEN
PDSEKTQEFL EKFINIKTSI FLGAQDLTAF VKRYFDSVLS KTLNISSDGA KELNLLSREL
INLFNDKDFP HYTPFIGDIR KIKRLINTLV LLDIDKVDFH NNDFNKRDLL HLILILIYSP
STFRKIYESE TSGKSGTFSW IQQGNSLKNS EFYDSFKAKL SETSSIKFLL SKLFDAPPES
ADHFPESEKR SRAVFQDKHR PLEKHLHLIA KLSRPISWES HRFLLNKKDE LFKTNAIKPY
LDQISEFPPL DNESGLHEFW RIVTSHSGAL ETDKAVTIIE YLIDTLPNYS LLNGDELNEF
RSTAVRYIAK LLDENITSLE KSSVPHLSPA ESAIIKLVYG DDNGSIGIIS KLAPPERGAL
GLHDLMTFRH HCTIKTKRER LWQALILHGN ERTLYSDRVE ETKDQAREIS QFIFGLFRRQ
YIESGKNILA EIDSINSIAL FGRYKTILTE SKDTKIWEEK VNRKKHEIKD TITSKLGNLI
IDDFGVFDES GLEDNHGISK AFSEYLFSIC FDPKSPNGLL HFAEYLLNFA NNTLQDINNP
EDKSGLSALL NNLDNEQLEN YWKNNHEAIK TRTDEEKDRV IYKTYSQPTF HSDLRLAFRA
LDSLFLPEKT AGGETL