Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4919 |
Symbol | |
ID | 3714041 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 5541905 |
End bp | 5543182 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_350647 |
Protein GI | 77461140 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000000084695 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCGGCT TATTCCGCCA CGCTATTGCC GCTGCCATGA CCCAGACTTC CGCCGCCCCT TCCGCTCACG TCGCCATCAT CGGCGGTGGC CCCGCCGGCC TGATGGCCGC CGAAGTGCTG AGCCAGGGCG GAGTCCGCGT CGACCTGTAC GACGGCATGC CCTCGGTGGG CCGCAAGTTC CTGCTGGCCG GGGTCGGCGG CATGAACATC ACCCATTCCG AAGCCTGGCC GGCCTTCCTC TCGCGCTACG CCGAACGCGC CCCGAACATC GCCCCGCTGC TGCGAGCGTT CGACGCCGAC GCACTGTGCC GCTGGATCCA TGAACTGGGC ATCGAAACCT TCGTCGGCAG CTCTGGCCGG GTGTTCCCCA CCGACATGAA AGCCGCGCCA TTGCTGCGCG CCTGGCTCAA GCGCCTGCGC GACAGCGGCG TGGTTATCCA CACCCGCCAC CGCTGGCTCG GCTGGGACGA AAACGGCGCG TTGCGCATCG ACAGCCCGGA GGGCGAGAAA ACCCTCAACC CCGACGCCAC CTTGCTCGCC CTCGGCGGCG GCAGCTGGTC GCGGCTTGGC TCCGACGGCG CGTGGATGCT GCCGCTGGAG CAGCGCGGTG TAGGCCTGGC GCCGTTGCAG CCGAGCAATT GCGGCTTCGA GGTGCAGGCC TGGAGCGAAG TGATGGTCAG CAAATTCGCC GGCGCGCCGC TGAAAAATAT CGCCATCGGT TTGAACGACG ACGTCCCTCG TCTGGGTGAA TGCGTGATTA CCGCGACCGG CATCGAGGGC AGCCTGATCT ACGCGCTGTC GGCGCCGATA CGTGAGGCGA TCAATGTCCA CGGTGTCGCG ACCATTCACA TCGACCTGCT GCCCGGCCGC CCTGTGGATA AATTGCAGGC GGCATTGAGC AAACCTCGGG GTTCGCGCTC GATGGCCAAG CATCTGCACA GTCAGGTGGG GATTGATGGG GTGAAAGCGG CGTTGCTGCG AGAACTCACT GACGCTGCAA CGTTTGCCGA TCCGGCGTTG TTGGCCCGGG CGATCAAAGC CTTGCCGCTG ACGCTGGTGA AAACCCGGCC GCTGGATGAG GCGATCAGCA GTGCCGGCGG GGTGACGTTC GAGGCGATGG ATGAGCGGAT GATGCTCAAG GCGTTGCCGG GGGTGTTCTG TGCGGGGGAG ATGCTGGATT GGGAAGCACC GACGGGTGGG TATTTGCTGA CGGCGTGTTT TGCCAGTGGC CGGGCGGCGG GGTTGGGAAT GCTGGACTGG TTACGACGTA AAAGCTGA
|
Protein sequence | MRGLFRHAIA AAMTQTSAAP SAHVAIIGGG PAGLMAAEVL SQGGVRVDLY DGMPSVGRKF LLAGVGGMNI THSEAWPAFL SRYAERAPNI APLLRAFDAD ALCRWIHELG IETFVGSSGR VFPTDMKAAP LLRAWLKRLR DSGVVIHTRH RWLGWDENGA LRIDSPEGEK TLNPDATLLA LGGGSWSRLG SDGAWMLPLE QRGVGLAPLQ PSNCGFEVQA WSEVMVSKFA GAPLKNIAIG LNDDVPRLGE CVITATGIEG SLIYALSAPI REAINVHGVA TIHIDLLPGR PVDKLQAALS KPRGSRSMAK HLHSQVGIDG VKAALLRELT DAATFADPAL LARAIKALPL TLVKTRPLDE AISSAGGVTF EAMDERMMLK ALPGVFCAGE MLDWEAPTGG YLLTACFASG RAAGLGMLDW LRRKS
|
| |