| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_4836 |
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| Symbol | |
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| ID | 3717315 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | - |
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| Start bp | 5455241 |
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| End bp | 5456203 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | |
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| Product | ribosomal large subunit pseudouridine synthase D |
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| Protein accession | YP_350564 |
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| Protein GI | 77461057 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.474352 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGATA AAATTGAACT TCGCGCAGAG GTGCCGTCCG AATTGGGCGG CCAACGCCTC
GATCAAGTCG CCGCCCAACT CTTCGCCGAG CACTCGCGCT CGCGCCTTTC CGCCTGGATC
AAAGAAGGTC GCCTGACTGT GGACGGGGCG GTCATCCGCC CGCGCGACAT TGTTCATGGC
GGTGCCATCC TTGAGCTCAC TGCCGAGCAG GAGGCCCAGG GTGAATGGGT CGCTCAGGAC
ATCGAACTCG ACATCGTCTA TGAAGACGAC GACATTCTGG TGATCAACAA GCCTGCGGGT
CTGGTGGTGC ACCCGGCTGC CGGTCACGCT GATGGCACCT TGCTCAACGC CTTGCTGCAC
CACGTGCCGG ACATCATCAA TGTCCCGCGC GCCGGTATCG TGCATCGTCT GGACAAGGAC
ACCACCGGTC TGATGGTGGT GGCCAAGACC ATTCAGGCGC AGACCAAGCT GGTCGCCCAG
CTGCAGAGCC GTAGCGTCAG CCGGATCTAC GAGTGCATCG TGATCGGCGT GGTGACCGCC
GGCGGCAAGA TCAACGCCCC GATCGGCCGC CACGGCCAGC AGCGCCAGCG CATGGCGGTG
ATGGAAGGCG GCAAGCCTGC CGTCAGCCAC TACCGCGTGC TGGAGCGTTT CCGTTCCCAC
ACCCACGTTC GGGTGAAGCT GGAAACCGGT CGTACCCACC AGATTCGCGT GCACATGGCG
CACATCAACT TCCCGTTGGT CGGCGACCCG GCATACGGCG GTCGTTTCCG CATTCCCCCG
GCCGCGAGCC AGACCATGGT CGAATCCCTC AAGCACTTCC CCCGTCAGGC CCTGCATGCG
CGGTTCCTTG AGCTGGATCA CCCGACCACC GGTGAGCGCA TGAGCTGGGA ATCGCCGCTG
CCGGAAGATC TGGTGTGGCT GCTGACCCTG CTCAAGCAGG ATCGCGAGGC ATTCGTCGGA
TGA
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| Protein sequence | MSDKIELRAE VPSELGGQRL DQVAAQLFAE HSRSRLSAWI KEGRLTVDGA VIRPRDIVHG
GAILELTAEQ EAQGEWVAQD IELDIVYEDD DILVINKPAG LVVHPAAGHA DGTLLNALLH
HVPDIINVPR AGIVHRLDKD TTGLMVVAKT IQAQTKLVAQ LQSRSVSRIY ECIVIGVVTA
GGKINAPIGR HGQQRQRMAV MEGGKPAVSH YRVLERFRSH THVRVKLETG RTHQIRVHMA
HINFPLVGDP AYGGRFRIPP AASQTMVESL KHFPRQALHA RFLELDHPTT GERMSWESPL
PEDLVWLLTL LKQDREAFVG
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