| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_4834 |
|---|
| Symbol | |
|---|
| ID | 3717313 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 5451827 |
|---|
| End bp | 5454391 |
|---|
| Gene Length | 2565 bp |
|---|
| Protein Length | 854 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | |
|---|
| Product | chaperone clpB |
|---|
| Protein accession | YP_350562 |
|---|
| Protein GI | 77461055 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0201945 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.188995 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTATAG ACCGTTTAAC CAGCAAATTG CAGTTGGCGT TGTCCGATGC CCAATCCCTG
GCTGTTGGCC ACGATCATCC TGCCATCGAG CCGGCGCATT TGATGCAGGC CATGCTTGAA
CAGCAGGGTG GTTCGATCAA ACCCCTGTTG ATGCAGGTGG GCTTCGACGT CAACAGCTTG
CGTAAAGAGC TGACCAAAGA GCTCGATCAA TTACCGAAAA TCCAGAATCC GACCGGCGAC
GTCAACATGT CGCAGGATCT GGCGCGTCTG CTCAACCAGG CCGATCGTCT GGCCCAGCAG
AAGGGCGATC AGTTCATTTC CAGCGAGCTG GTGCTGCTCG CCGCGATGGA CGAGAACAGC
AAGCTCGGGA AGTTGCTGCT CGGCCAGGGC GTGAGCAAAA AGGCTCTGGA AAATGCAATC
AACAACCTGC GCGGTGGCGA GGCGGTCAAC GACGCCAACC ACGAAGAGTC GCGTCAGGCA
CTGGATAAGT ACACCGTCGA CCTGACCAAA CGCGCCGAAG AAGGCAAGCT TGACCCGGTG
ATCGGCCGTG ACGACGAGAT CCGTCGCACC ATTCAGGTGC TGCAACGCCG TACCAAGAAC
AACCCGGTGC TGATCGGCGA GCCTGGCGTG GGTAAAACCG CGATTGCCGA AGGTCTGGCC
CAGCGCATCA TCAATGGTGA AGTGCCGGAC GGCCTGCGCG GCAAGCGTCT GCTGTCCCTC
GATATGGGGG CGCTGATTGC CGGTGCCAAG TATCGCGGCG AGTTTGAAGA GCGCCTGAAA
GCGCTGCTCA ACGAGCTGTC GAAGCAGGAA GGGCAGATCA TTCTGTTCAT CGACGAACTG
CACACCATGG TCGGCGCCGG CAAGGGCGAA GGCTCGATGG ACGCCGGCAA CATGCTTAAA
CCGGCCCTGG CCCGTGGTGA GCTGCATTGC GTCGGCGCGA CCACGCTCAA CGAGTACCGC
CAATATATAG AGAAGGACGC GGCCCTCGAG CGACGCTTCC AGAAAGTGCT GGTGGACGAG
CCGAGCGAAG AGGACACCAT CGCGATCCTG CGTGGCCTCA AGGAGCGTTA CGAGGTTCAC
CACAAGGTGG CGATCACCGA CGGCGCGATC ATCGCGGCGG CCAAGCTCAG CCATCGCTAC
ATCACTGACC GGCAGCTGCC GGACAAGGCG ATCGACCTGA TCGACGAGGC GGCCAGCCGC
ATCCGCATGG AGATCGACTC CAAGCCGGAA GTGCTGGATC GTCTTGAGCG GCGCCTGATT
CAACTGAAGG TGGAATCTCA GGCACTGAAG AAAGAAAGTG ACGACGCGGC GAAGAAACGT
CTGGAGAAAC TCCAGGAAGA AATCGATCGC CACGAGCGTG AGTACTCCGA TCTGGAAGAA
ATCTGGAACT CGGAAAAAGC CGAGGTGCAG GGCTCTGCGC AGATTCAGCA GAAGATCGAA
CAGTCCCGTC AGGAGCTGGA AGCCGCGCGC CGTAAAGGCG ACCTGAACCG CATGGCCGAG
TTGCAGTATG GGGTGATCCC GGATCTGGAA CGCAGCCTGC AAATGGTCGA CCAGCACGGC
AAGAGCGAAA ACCAGTTGCT GCGCAGCAAG GTGACCGAAG AGGAAATCGC CGAAGTCGTT
TCGAAGTGGA CCGGTATTCC GGTGTCGAAA ATGCTCGAAG GCGAACGCGA CAAGCTGATG
AAGATGGAAA GCCTGTTGCA TCAACGCGTG ATCGGCCAGG ACGAAGCGGT GGTGGCAGTA
GCCAACGCGG TGCGGCGTTC CCGTGCCGGG TTGTCCGACC CGAACCGCCC GAGCGGCTCG
TTCATGTTCC TCGGCCCGAC CGGTGTCGGT AAAACCGAGC TGTGCAAGGC GCTGGCCGAA
TTCCTCTTCG ATACGGAAGA GGCGATGGTG CGAATCGACA TGTCCGAGTT CATGGAGAAA
CATTCCGTGG CACGGTTGAT CGGGGCACCA CCGGGCTACG TCGGCTACGA AGAGGGTGGT
TACCTGACCG AAGCGGTACG GCGCAAGCCT TACTCGGTGA TCCTGCTGGA CGAAGTCGAG
AAGGCGCATC CGGACGTGTT CAACATCCTG CTGCAAGTGC TGGAGGACGG ACGTCTGACC
GACAGCCATG GCCGCACGGT GGACTTCCGC AATACCGTGA TCGTCATGAC CTCCAATCTC
GGTTCGATGC AGATCCAGGA ACTGGTCGGT GATCGTGAAG CACAACGGGC AGCGGTGATG
GATGCGATTT CCACCCACTT CCGTCCGGAG TTCATCAACC GCGTTGACGA AGTGGTGATC
TTCGAGCCAT TGGCGCGGGA TCAGATCGCG GGCATCACCG AGATCCAGCT GGGCCGTCTG
CGCAACCGTC TGGCCGAGCG CGAGCTGAAG CTGGAACTGA GCCCTGAGGC GATGGACAAG
CTGATTGCCG TCGGTTACGA CCCGGTCTAT GGCGCACGGC CGCTGAAGCG GGCGATCCAG
CGCTGGATCG AGAACCCGTT GGCGCAGTTG ATCCTGTCGG GACGCTTCAT GCCGGGCGAG
ACCGCAACCG GTGTGGTGGA GAACGACGAG ATCACGTTCA ACTGA
|
|---|
| Protein sequence | MRIDRLTSKL QLALSDAQSL AVGHDHPAIE PAHLMQAMLE QQGGSIKPLL MQVGFDVNSL
RKELTKELDQ LPKIQNPTGD VNMSQDLARL LNQADRLAQQ KGDQFISSEL VLLAAMDENS
KLGKLLLGQG VSKKALENAI NNLRGGEAVN DANHEESRQA LDKYTVDLTK RAEEGKLDPV
IGRDDEIRRT IQVLQRRTKN NPVLIGEPGV GKTAIAEGLA QRIINGEVPD GLRGKRLLSL
DMGALIAGAK YRGEFEERLK ALLNELSKQE GQIILFIDEL HTMVGAGKGE GSMDAGNMLK
PALARGELHC VGATTLNEYR QYIEKDAALE RRFQKVLVDE PSEEDTIAIL RGLKERYEVH
HKVAITDGAI IAAAKLSHRY ITDRQLPDKA IDLIDEAASR IRMEIDSKPE VLDRLERRLI
QLKVESQALK KESDDAAKKR LEKLQEEIDR HEREYSDLEE IWNSEKAEVQ GSAQIQQKIE
QSRQELEAAR RKGDLNRMAE LQYGVIPDLE RSLQMVDQHG KSENQLLRSK VTEEEIAEVV
SKWTGIPVSK MLEGERDKLM KMESLLHQRV IGQDEAVVAV ANAVRRSRAG LSDPNRPSGS
FMFLGPTGVG KTELCKALAE FLFDTEEAMV RIDMSEFMEK HSVARLIGAP PGYVGYEEGG
YLTEAVRRKP YSVILLDEVE KAHPDVFNIL LQVLEDGRLT DSHGRTVDFR NTVIVMTSNL
GSMQIQELVG DREAQRAAVM DAISTHFRPE FINRVDEVVI FEPLARDQIA GITEIQLGRL
RNRLAERELK LELSPEAMDK LIAVGYDPVY GARPLKRAIQ RWIENPLAQL ILSGRFMPGE
TATGVVENDE ITFN
|
|---|
| |