| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_4684 |
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| Symbol | |
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| ID | 3714585 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | + |
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| Start bp | 5288030 |
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| End bp | 5289841 |
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| Gene Length | 1812 bp |
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| Protein Length | 603 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | |
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| Product | LppC putative lipoprotein |
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| Protein accession | YP_350412 |
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| Protein GI | 77460905 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0653757 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGCTT GCCTGCGGCT GTTCACTGCC CTCTGCCTCG CTGCCTTGCT GGCGGCTTGC
GCCAGCTCCC CTTCCTCCAG CCTTGGCGAA CTTCCTCGGA CCCCGGATGC CACCATCGAG
CAATTGCTCG AACAGGCTGC CCAGGCCAAA TCGCCGGACA AGGCTGCGCT GTTGCGCCTG
AGTGCGGCAG ACATGGCGTA CCGCCAGGGC AATGCCGGAC AGTCCGCGCA AATCCTGCAG
CAAGTGCCGA TGGAACAACT CCAGCCGGGC CAGCAGGCAT TCGCCAGCAC CCTGTCTGCT
GAACTGGCCA TGACCCGCAA CCAGCCGAAA GCCGCGCTGA CTGCCTTGAG CCATCCAAGC
CTGCAACGCC TGAGCGAACT GTCCGTACCG CTGCAAGTTC GCGCCGGCAC GGTTCACGCC
CGCGCCCTTG AAGCCGACGG CCAGACCCTG GCCGCTGCCC GCGAGCGCAT CTTCATCGCG
CCGATGCTGG AAGGCGAAGC AGCCAGCAAG AACCACGAAG CGATCTGGAC CCTGATTGCG
TCGCTGCCGG CCGATCAACT GCAAGCGAAC ACCACCGATG ACCTCGGCGG CTGGATGAGC
CTGGCCCTGG CCGTGAAAAC CGCCGGCACC CTGGAACAGC AGCAAGCCGC CATCGACAAC
TGGCGCAACC AGCATCCAAA GCACCCAGCC GCGATCAACC TGCCGCTGCC CCTGACCAAA
CTCAAGGAAC TGGCCAGCCA GCCCCTGAGC AAGATCGCCC TGCTGTTGCC ACAGGACGGC
CAGTTGGCCT CGGTCGGCAA GGCCCTGCGT GACGGCTTCA TGGCCGCACA CTATCAGGCT
CAGCAAGCCG GCCAGAAACC ACCGGCCATC GAGTTCTACG ACAGCTCGAA ACTGACCAAT
CTCGACGAGT TCTACCGCAA GGCCCAGGCC GATGGCGTGC AACTGGTCGT CGGCCCGCTG
GAGAAGCCGC TGGTCAAACA GTTGAGCACT CGCCCGCAAC TGCCGATCAC CACCCTCGCC
CTGAACTACA GCGAAGGCGA TCAAGGCCCG GCGCAGTTGT TCCAGTTCGG TCTGGCCGCT
GAAGACGAAG CCCGCGAAGT CTCCCGCCGC GCCCGTGCAG ACGGCCTGCA CCGCGCCGCG
ATCATGGTGC CGAAAGGCGA ATGGGGCGAC CGCGTCCTGC GCGCGTTCAG CCAGGACTGG
CAAGCCAACG GCGGCAGCAT TGTCGCCACC GAGCGCGTCG ATCAGCCGGT GCAACTGGCC
CAGCAGATCG CCGACATGTT CCAACTGCGT CAGAGCGAAG CTCGCGCCAA GAGCCTGCAG
AATGCTGCCG GCACCAACGT TGCCGCCCAG CCTTCGCGTC GCCAGGACAT CGAATTCATC
TTCCTCGCCG CCACACCACA ACAGGCGCAG CAAATCAAGC CGACCCTGAA TTTCCAGTAC
GCCGGTGACG TGCCGGTCTA CGCGACCTCC CACGTGTTCA GCGCCAGCGG CGACGTGAAC
CAGTACAACG ACATGAACGG CGTGCGCTTC TGCGAAACCC CGTGGCTGCT GGAAACCAGC
GATCCGCTGC GTCAGCAGGT CACCGCGCAA TGGCCACAAG CCGCCGGCAG CCTCGGCCGC
CTGTACGCGA TGGGCGTCGA TGCCTACCGC CTCGCGCCGC GCCTGGATCA GCTCAAGGCA
CTGCCGGACA GCCGCATTGA AGGTCAGTCG GGCAGCTTGG GCATGACTCA GTCCCAGCGA
GTCGTACGTC AGTTGCCATG GGCACAGTTC GTCAGCGGTC AGATCCAGCG CCTGCCGGAC
ACTCCACGCT GA
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| Protein sequence | MIACLRLFTA LCLAALLAAC ASSPSSSLGE LPRTPDATIE QLLEQAAQAK SPDKAALLRL
SAADMAYRQG NAGQSAQILQ QVPMEQLQPG QQAFASTLSA ELAMTRNQPK AALTALSHPS
LQRLSELSVP LQVRAGTVHA RALEADGQTL AAARERIFIA PMLEGEAASK NHEAIWTLIA
SLPADQLQAN TTDDLGGWMS LALAVKTAGT LEQQQAAIDN WRNQHPKHPA AINLPLPLTK
LKELASQPLS KIALLLPQDG QLASVGKALR DGFMAAHYQA QQAGQKPPAI EFYDSSKLTN
LDEFYRKAQA DGVQLVVGPL EKPLVKQLST RPQLPITTLA LNYSEGDQGP AQLFQFGLAA
EDEAREVSRR ARADGLHRAA IMVPKGEWGD RVLRAFSQDW QANGGSIVAT ERVDQPVQLA
QQIADMFQLR QSEARAKSLQ NAAGTNVAAQ PSRRQDIEFI FLAATPQQAQ QIKPTLNFQY
AGDVPVYATS HVFSASGDVN QYNDMNGVRF CETPWLLETS DPLRQQVTAQ WPQAAGSLGR
LYAMGVDAYR LAPRLDQLKA LPDSRIEGQS GSLGMTQSQR VVRQLPWAQF VSGQIQRLPD
TPR
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