Gene Pfl01_4602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4602 
Symbol 
ID3713601 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5203720 
End bp5204778 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content64% 
IMG OID 
ProductXRE family transcriptional regulator 
Protein accessionYP_350330 
Protein GI77460823 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCGG CGCATCCCGA AGTTGTAGCA GCGAATCGCG TTAACCCCGG TGAGACCCTG 
CGCCAGGCCC GCGAAAGCAA TGGCTGGTCG CTGGCCGAAG TGGCCCTCAA GCTCAACCTC
ACCGTGACTT CCCTGAGCAA TCTTGAAGCC GGCGCATTCG ACAAGTTGCC CGGGCATACC
TTCGCTCGCG GCTACATTCG CGCCTACGCC AAATTGCTCG GCATGGATCA GACCGTTCTG
GTCCAGCAAT TCGACCAGTC TACCGGCACC GATTCCCAAG GCAGCAACGT CCACGCTCTG
GGCCGTATCG AAGAGCCGGT ACGGGTTTCC CACACCATTT TGCGTATCGT CAGCCTGTTG
CTGCTGATCG CAGTCATCGG CGGTGGTTTC GTCTGGTGGC AGGATCAGAC TTCGCAGCGC
ACCAAGGACC TGATTGGCCT GGCCCCGGAG CACGTCGAAG TCGAAGGCGC CGATGGCACC
ACCCAGATTC ATCCGCTCGA CGAGCCGGAA GATCAGGCAG TCGCGGAAGG CGAAGCCGAG
GGCTCGACCG CTCTGGCACT GCCTCAATCG GAATCCACGG CTGAATCGAC CGGCGCCGAG
ACCGATGCCG CGGCTCCAGC GACTGCACCG GTTGCTCCGG CACCTGCTGC GCCAGCCGCT
ACTCCGACTG CACCGGCTCA TACGCCAGCG CCTGTGGTTG CTGCTCCTGC AAATCCGGCA
CCTGCCGCTC CGGCCACGCC TGCACCGACC GTTACTGCCC CGGCAGCTCC GGCCGTCGCG
GCACCCGCGC CGACAGCGCC CGTTGCTCCG GCTGCTGGTC AAGGCCAGGT TCAGGTGCAG
TTCATCGCCG ATTGCTGGAC TCAAGTGACC GATGGCAGCG GCAAAGTGCT GTACAGCGGC
CTCAAGCGTA AGGGCGACAG CTTGTCTGTC GTCGGCAAGC CTCCGTTTGC CGTGCGTCTG
GGCGTTGCCC GTGGCGCGCA GGTCAGCTAC AACGGCCAGC CGGTCGATGT CGCTCCGTTC
ACCAGTGGCG AGACTGCTCG CCTGAAGTTG GGTCAATAA
 
Protein sequence
MKAAHPEVVA ANRVNPGETL RQARESNGWS LAEVALKLNL TVTSLSNLEA GAFDKLPGHT 
FARGYIRAYA KLLGMDQTVL VQQFDQSTGT DSQGSNVHAL GRIEEPVRVS HTILRIVSLL
LLIAVIGGGF VWWQDQTSQR TKDLIGLAPE HVEVEGADGT TQIHPLDEPE DQAVAEGEAE
GSTALALPQS ESTAESTGAE TDAAAPATAP VAPAPAAPAA TPTAPAHTPA PVVAAPANPA
PAAPATPAPT VTAPAAPAVA APAPTAPVAP AAGQGQVQVQ FIADCWTQVT DGSGKVLYSG
LKRKGDSLSV VGKPPFAVRL GVARGAQVSY NGQPVDVAPF TSGETARLKL GQ