Gene Pfl01_4569 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4569 
Symbol 
ID3713530 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5162354 
End bp5163577 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content57% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_350297 
Protein GI77460790 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAA CAGCGTGTTG GCTGGGTTTG CTGACAGTGC TGGGCATGTC AGGGGCGCAG 
GCAGCGAACC AGGAGATCCG GGCGCTGTTC CAGCCCGATC CGTCGCAACC CAATAAAAAC
GTGTTCATCA ACAAGACGCC GAACAGTGGT TATTGCGCCA GTCATCCGGC CCAATGCGCG
GACAACAACA TGTTCAGTAT TCAGGTGCCG ATTCGCTTCA GCACCTTCAC GCCCATGTTT
TCGGGTAACG GCGTGTGGGT AAAAGTGCCG TCCGAATGGC GACAGTTGAA CGTGATCAAT
CATGAAACTC AGCAAACAAG CATCGTTGAA GTCCGTATCA GCGGTATCGG GTCGAAGTTT
CAACTGAGTA AACCGGTCAC CGAACTGACG GGACAGACCG ATGTGCTTGA GGGGCATCGA
AAGTTGTGGA CCGGCAATTC CTGGGTATAC GCACCGCCGC CATGCGAGTA CAGCGGCGTT
GGCTATTACA GCCCGACCAC TTACCAGTTT TTCTGGAAAA CGCCGCAGCC GGGAACCTGC
ATCAAGACGG CGGCGTTCGA CGTGGGGCAC ATGTCCTTCG ACTACCTCGA TATCGCCTAT
GAGTTGCGCA CGCCTGATCC CTTGAGCATG TCGTCCGGGT TGTACACCGG ATCGTTGACC
TACAGCGTCG GTCGAGGCAG CGCCGATTTC ACGATGGGGC CGTTCATGGG GGCGGATGAC
GGCAACCTCA CGCTGGATTT CGTGCTGGAC GTACAGCACA CACTGAAGGT GGATCTGCCA
CCGGGTGGCA ACCGGATTAC CTTGCAGCCC GAGGGCGGGT GGCAGCGCTG GTTGAATTCA
GGGCGGGCCC CGGAACGCCT GTTCAGTGAC CAGACCTTCC ACATCTCGGC CAGCTCCAGA
TTCAAGATGT ACCTGGAGTG CGGCTCCGGA ACGGTAACGG CCTGTGGATT ATGGAATGAG
GGGACCAACT ACGGCACACC GATCATCGTC AGTGTGACCC TGCCCAACGG TTTGACCGAC
ACCAGTGGAC GGCCAGTCAA GCGACAGGAA CTGTTCCCGC AGGAGTCGAG GGCCATCTTT
TTTCAACCGG GAATCTATGT CGATCGCAAG CCCGGAACCC TGCATTTCGA AATCGACAAG
GCCAACACCG AACGAATACT CAAGGCTGAT CGTGGAAACA GGTATTCCAG TACGGTCGTG
GTGATTTGGG ATTCGGAAAT CTGA
 
Protein sequence
MKKTACWLGL LTVLGMSGAQ AANQEIRALF QPDPSQPNKN VFINKTPNSG YCASHPAQCA 
DNNMFSIQVP IRFSTFTPMF SGNGVWVKVP SEWRQLNVIN HETQQTSIVE VRISGIGSKF
QLSKPVTELT GQTDVLEGHR KLWTGNSWVY APPPCEYSGV GYYSPTTYQF FWKTPQPGTC
IKTAAFDVGH MSFDYLDIAY ELRTPDPLSM SSGLYTGSLT YSVGRGSADF TMGPFMGADD
GNLTLDFVLD VQHTLKVDLP PGGNRITLQP EGGWQRWLNS GRAPERLFSD QTFHISASSR
FKMYLECGSG TVTACGLWNE GTNYGTPIIV SVTLPNGLTD TSGRPVKRQE LFPQESRAIF
FQPGIYVDRK PGTLHFEIDK ANTERILKAD RGNRYSSTVV VIWDSEI