| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_4488 |
|---|
| Symbol | |
|---|
| ID | 3717747 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 5060507 |
|---|
| End bp | 5061853 |
|---|
| Gene Length | 1347 bp |
|---|
| Protein Length | 448 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_350216 |
|---|
| Protein GI | 77460709 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.0248364 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTCGTA TGCCTCTGGC TACCGCCAGT CTGCTGGCCA TCGCTATTTC CCTCGCCGGT
TGCGGCGAAG GTAAAGACAA AGAAAAGGCC GCCGCTCCTG CGCCGACTCC GGCTGCCAGC
ACCGCTGCAC CGGCTGCGCC AGCAGCAGCC GGTAAAGTCG ACGAGGCCGC CGGCAAAGCC
GTTGTCGCGC ACTACGCCGA CATGGTCTTC GCCGTTTACA GCGACGCCGA ATCCACCGCG
AAAACCCTGC AAACCGCCAT CGACGCGTTC CTCGCCAAGC CGGACGCCGA CACCCTGAAA
GCCGCCAAGG CTGCCTGGGT CGCCGCCCGT GTTCCTTACC TGCAGAGCGA AGTGTTCCGC
TTCGGCAACA CCATCATCGA CGACTGGGAA GGTCAGGTGA ACGCCTGGCC TCTGGACGAA
GGCCTGATCG ACTACGTCGA CAAGTCCTAC GAACACGCAC TGGGCAATCC AGGCGCCACC
GCCAACATCA TCGCCAACAC CGAAGTACAG GTCGGCGAAG ACAAGGTCGA CGTCAAGGAC
ATCACCCCGG AAAAACTCGC CAGCCTGAAC GAGCTGGGCG GTTCCGAAGC CAACGTTGCC
ACCGGCTACC ATGCCATCGA ATTCCTGCTC TGGGGCCAGG ATCTGAACAG CACCGGCCCG
GGCGCCGGCA ACCGTCCGGC GTCGGACTAT CTGGAAGGCA AAGGCGCCAC TGGCGGTCAC
AACGATCGTC GTCGTGCCTA CCTGAAAGCC GTGACCCAGC TGCTGGTCAG CGATCTGGAA
GAAATGGTCG CCAACTGGAA GCCGAACGTG GCCGACAACT ACCGCGCCAC CCTGGAAGCC
GAACCGGCTG AAAGCGGCCT GCGCAAAATG CTGTTCGGCA TGGGCAGCCT GTCCCTGGGC
GAACTGGCCG GCGAGCGCAT GAAGGTGTCC CTGGAAGCGA ATTCCCCGGA AGACGAACAG
GATTGCTTCA GCGACAACAC CCACAACTCG CACTTCTACG ATGCCAAGGG CATTCGTAAC
GTGTACCTGG GCGAGTACAC CCGCGTCGAC GGCACCAAAC TGACCGGCGC CAGCCTGTCG
TCGCTGGTGG CCAAGGTCGA CCCGGCTGCC GACACCGCGC TGAAAGCCGA TCTGGCCGCC
ACCGAAGCCA AGATCCAGGT CATGGTCGAT CACGCCAACA AGGGTGAGCA CTACGACCAG
TTGATCGCAG CCGGCAACAC GGCTGGTAAC CAGATCGTGC GCGATGCCAT CGCTTCGCTG
GTCAAGCAGA CCGGTTCGAT CGAGGCCGCA GCCGGCAAGC TCGGCATCAG CGACCTGAAC
CCGGACAACG CCGATCACGA GTTCTGA
|
|---|
| Protein sequence | MIRMPLATAS LLAIAISLAG CGEGKDKEKA AAPAPTPAAS TAAPAAPAAA GKVDEAAGKA
VVAHYADMVF AVYSDAESTA KTLQTAIDAF LAKPDADTLK AAKAAWVAAR VPYLQSEVFR
FGNTIIDDWE GQVNAWPLDE GLIDYVDKSY EHALGNPGAT ANIIANTEVQ VGEDKVDVKD
ITPEKLASLN ELGGSEANVA TGYHAIEFLL WGQDLNSTGP GAGNRPASDY LEGKGATGGH
NDRRRAYLKA VTQLLVSDLE EMVANWKPNV ADNYRATLEA EPAESGLRKM LFGMGSLSLG
ELAGERMKVS LEANSPEDEQ DCFSDNTHNS HFYDAKGIRN VYLGEYTRVD GTKLTGASLS
SLVAKVDPAA DTALKADLAA TEAKIQVMVD HANKGEHYDQ LIAAGNTAGN QIVRDAIASL
VKQTGSIEAA AGKLGISDLN PDNADHEF
|
|---|
| |