Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4467 |
Symbol | |
ID | 3717666 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 5037901 |
End bp | 5038749 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | binding-protein dependent transport system inner membrane protein |
Protein accession | YP_350195 |
Protein GI | 77460688 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.380773 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.874975 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTGCCC TGATCAAGAA GCGTCAGTCG CTGTTGCCGG GCGACACCGG CAAGTTCGCC GGCATCCTGT CCGGGATCAT TTTGTTCCTG GCCGTGTTGC CGATCCTGAC CATGATCGTG ATGTCGTTCA GCGGCGCGTC GAACCTCGAC TTCCCGCCGA GCAGCTACAG CCTGCAGTGG TACAAGGCGG CGTGGCACAC CTTCGTCTCG CCGGATGCCA GCGATGTGCT GAGCCTCGGC CAGGCCATGG GCACCAGTTT GCTGGTGTCG TGCCTGACGA TGATTTTCGC CACGCTGATC GCGGTGCCGG CGGCCTACGC GCTGACCCGT TGCGAGTTCC GTGGCAAGGG CGTGGCGCTG CAATTGATGT CGCTGCCGCT GGTGTTCCCG ATGGTGGTGC TGGGGCTGGC CTTGCTGCTG GTGTTCGACA GCCTGCCGTT CCACATGACC ACCTCGCGAC TGGTGATTGC CCACGTGATT CTGGCGCTGC CGTTCGTGGT GAAGAACTGC ACGGCGGCCA TGCTTTCCAT CGGCAGCGAA GTCGAAGAGG CCGCGCAGAT GCTCGGCGCC TCGCCGTTGC GCGCCATCGT CGATGTGGTG GTGCCGCTGA TGAAATCGGG GATTCTGGCG GGGATGCTGC TGGCGTTCAT CGTCTCGTTC AACGAATTCA CCGTGACCTA TTTCCTCTAC ACCATTGACG TCATGACCGT GCCGATCTGG ATGTACAGCC GCACCGTGTC ATCGCTCGAC CCTACCGTGT TTTCGTTTGC CGTGCTGATC GTGCTGATCG ACTTCGTCCT GATCTGGGCG TTGGAGAAAC TGGTCGGCGA GGGTGGCGTT TCCTTCTGA
|
Protein sequence | MSALIKKRQS LLPGDTGKFA GILSGIILFL AVLPILTMIV MSFSGASNLD FPPSSYSLQW YKAAWHTFVS PDASDVLSLG QAMGTSLLVS CLTMIFATLI AVPAAYALTR CEFRGKGVAL QLMSLPLVFP MVVLGLALLL VFDSLPFHMT TSRLVIAHVI LALPFVVKNC TAAMLSIGSE VEEAAQMLGA SPLRAIVDVV VPLMKSGILA GMLLAFIVSF NEFTVTYFLY TIDVMTVPIW MYSRTVSSLD PTVFSFAVLI VLIDFVLIWA LEKLVGEGGV SF
|
| |