Gene Pfl01_4467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4467 
Symbol 
ID3717666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5037901 
End bp5038749 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content62% 
IMG OID 
Productbinding-protein dependent transport system inner membrane protein 
Protein accessionYP_350195 
Protein GI77460688 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.380773 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.874975 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCCC TGATCAAGAA GCGTCAGTCG CTGTTGCCGG GCGACACCGG CAAGTTCGCC 
GGCATCCTGT CCGGGATCAT TTTGTTCCTG GCCGTGTTGC CGATCCTGAC CATGATCGTG
ATGTCGTTCA GCGGCGCGTC GAACCTCGAC TTCCCGCCGA GCAGCTACAG CCTGCAGTGG
TACAAGGCGG CGTGGCACAC CTTCGTCTCG CCGGATGCCA GCGATGTGCT GAGCCTCGGC
CAGGCCATGG GCACCAGTTT GCTGGTGTCG TGCCTGACGA TGATTTTCGC CACGCTGATC
GCGGTGCCGG CGGCCTACGC GCTGACCCGT TGCGAGTTCC GTGGCAAGGG CGTGGCGCTG
CAATTGATGT CGCTGCCGCT GGTGTTCCCG ATGGTGGTGC TGGGGCTGGC CTTGCTGCTG
GTGTTCGACA GCCTGCCGTT CCACATGACC ACCTCGCGAC TGGTGATTGC CCACGTGATT
CTGGCGCTGC CGTTCGTGGT GAAGAACTGC ACGGCGGCCA TGCTTTCCAT CGGCAGCGAA
GTCGAAGAGG CCGCGCAGAT GCTCGGCGCC TCGCCGTTGC GCGCCATCGT CGATGTGGTG
GTGCCGCTGA TGAAATCGGG GATTCTGGCG GGGATGCTGC TGGCGTTCAT CGTCTCGTTC
AACGAATTCA CCGTGACCTA TTTCCTCTAC ACCATTGACG TCATGACCGT GCCGATCTGG
ATGTACAGCC GCACCGTGTC ATCGCTCGAC CCTACCGTGT TTTCGTTTGC CGTGCTGATC
GTGCTGATCG ACTTCGTCCT GATCTGGGCG TTGGAGAAAC TGGTCGGCGA GGGTGGCGTT
TCCTTCTGA
 
Protein sequence
MSALIKKRQS LLPGDTGKFA GILSGIILFL AVLPILTMIV MSFSGASNLD FPPSSYSLQW 
YKAAWHTFVS PDASDVLSLG QAMGTSLLVS CLTMIFATLI AVPAAYALTR CEFRGKGVAL
QLMSLPLVFP MVVLGLALLL VFDSLPFHMT TSRLVIAHVI LALPFVVKNC TAAMLSIGSE
VEEAAQMLGA SPLRAIVDVV VPLMKSGILA GMLLAFIVSF NEFTVTYFLY TIDVMTVPIW
MYSRTVSSLD PTVFSFAVLI VLIDFVLIWA LEKLVGEGGV SF