Gene Pfl01_4401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4401 
Symbol 
ID3713304 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4962030 
End bp4962527 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content57% 
IMG OID 
ProductOmpA/MotB 
Protein accessionYP_350129 
Protein GI77460622 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0950269 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.949799 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATGC TGAAGTTTGG TAAATTTGCT GCGCTGGCTC TGGCCATGGC TGTAGCTGTA 
GGTTGCTCGT CCAAAGGCGG CGACAACGCC GGTGAAGGCG CTGTTGATCC AAACGCTGGT
TACGGCGCAA ACACTGGTGC AGTTGACGGT TCCCTGAGCG AAGAAGCTGC TCTGCGCGCA
ATCACCACCT TCTACTTCGA ATACGACAGC TCGGACCTGA AGCCAGAAGC CATGCGCGCT
CTGGACGTTC ACGCCAAAGA CCTGAAAGCA AACGGCGCTC GCGTTGTTCT GGAAGGCAAC
ACCGACGAAC GTGGTACTCG TGAGTACAAC ATGGCACTGG GCGAGCGTCG TGCGAAAGCC
GTTCAGCGCT ACCTGGTACT GCAAGGTGTT TCCCCAGCTC AGCTGGAACT GGTTTCCTAC
GGCGAAGAGC GTCCAGTTGC TACCGGCAAC GACGAGCAGT CCTGGGCTCA AAACCGTCGC
GTCGAACTGC GTAAGTAA
 
Protein sequence
MEMLKFGKFA ALALAMAVAV GCSSKGGDNA GEGAVDPNAG YGANTGAVDG SLSEEAALRA 
ITTFYFEYDS SDLKPEAMRA LDVHAKDLKA NGARVVLEGN TDERGTREYN MALGERRAKA
VQRYLVLQGV SPAQLELVSY GEERPVATGN DEQSWAQNRR VELRK