Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4360 |
Symbol | |
ID | 3716878 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 4912703 |
End bp | 4913419 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | intradiol ring-cleavage dioxygenase |
Protein accession | YP_350088 |
Protein GI | 77460581 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCACC AGCCTTCAGC TCCAACGGTT TATCAACTGG CCCCCGAGCA AGTCGCCGGG CCATATTTCC GCAATCCCAA GCTGCTGCGT CGCAACATCA GCGAAGGCGC CGAAGGCCTG CCGTTGCTGC TGCGCCTGAC CATCGTCGAT GCCATGACCG CCGAGCCGAT CAGCGGTGCG CTGGTGGATA TCTGGCACTG CAACGCACGC GGCGCCTATT CCGGCTGGAG CCGGGTGAAC CCGGATCTGG AAGTCGACGT TGAGGATATC GGCTCGATCC CGCGAACCGA CGACGACACT TATTTGCGCG GCGGTCAGTT CAGCGACCAC AAGGGCAGGG TGCGCTTCAC CACGATCTAT CCGGGTTTCT ACGCCGGTCG CACCCTGCAT GTTCACGTGG CGGTGCGCAT CGTCGCCGGC AACGAATACC TGGAGGAGCG CAATGTGGCC TGGGTCGGGC AGCTGTATTT TCCGGAGGTG GTTTCCCGCG GCGTGCTCAA TGCCAAGGCC TACCGCGGGC GCAGTTCGCT GCCGGTGTGC AACAACGACG ATGCCTACTA CGCCAACATG GGCGGCGAAG AGTCGACCCT GACGGTGTGG CCGATCGGTC GTGATTCACA CGAGGACGGG TACTTCGGCC ACCTCACGAT CGGCATCGAC ACCTTTGCGG TGTCGTCGCA GATCAAGCCC GAGGACTTCG ACAAGTACAC GGTTTAA
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Protein sequence | MDHQPSAPTV YQLAPEQVAG PYFRNPKLLR RNISEGAEGL PLLLRLTIVD AMTAEPISGA LVDIWHCNAR GAYSGWSRVN PDLEVDVEDI GSIPRTDDDT YLRGGQFSDH KGRVRFTTIY PGFYAGRTLH VHVAVRIVAG NEYLEERNVA WVGQLYFPEV VSRGVLNAKA YRGRSSLPVC NNDDAYYANM GGEESTLTVW PIGRDSHEDG YFGHLTIGID TFAVSSQIKP EDFDKYTV
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