Gene Pfl01_4360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4360 
Symbol 
ID3716878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4912703 
End bp4913419 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content62% 
IMG OID 
Productintradiol ring-cleavage dioxygenase 
Protein accessionYP_350088 
Protein GI77460581 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCACC AGCCTTCAGC TCCAACGGTT TATCAACTGG CCCCCGAGCA AGTCGCCGGG 
CCATATTTCC GCAATCCCAA GCTGCTGCGT CGCAACATCA GCGAAGGCGC CGAAGGCCTG
CCGTTGCTGC TGCGCCTGAC CATCGTCGAT GCCATGACCG CCGAGCCGAT CAGCGGTGCG
CTGGTGGATA TCTGGCACTG CAACGCACGC GGCGCCTATT CCGGCTGGAG CCGGGTGAAC
CCGGATCTGG AAGTCGACGT TGAGGATATC GGCTCGATCC CGCGAACCGA CGACGACACT
TATTTGCGCG GCGGTCAGTT CAGCGACCAC AAGGGCAGGG TGCGCTTCAC CACGATCTAT
CCGGGTTTCT ACGCCGGTCG CACCCTGCAT GTTCACGTGG CGGTGCGCAT CGTCGCCGGC
AACGAATACC TGGAGGAGCG CAATGTGGCC TGGGTCGGGC AGCTGTATTT TCCGGAGGTG
GTTTCCCGCG GCGTGCTCAA TGCCAAGGCC TACCGCGGGC GCAGTTCGCT GCCGGTGTGC
AACAACGACG ATGCCTACTA CGCCAACATG GGCGGCGAAG AGTCGACCCT GACGGTGTGG
CCGATCGGTC GTGATTCACA CGAGGACGGG TACTTCGGCC ACCTCACGAT CGGCATCGAC
ACCTTTGCGG TGTCGTCGCA GATCAAGCCC GAGGACTTCG ACAAGTACAC GGTTTAA
 
Protein sequence
MDHQPSAPTV YQLAPEQVAG PYFRNPKLLR RNISEGAEGL PLLLRLTIVD AMTAEPISGA 
LVDIWHCNAR GAYSGWSRVN PDLEVDVEDI GSIPRTDDDT YLRGGQFSDH KGRVRFTTIY
PGFYAGRTLH VHVAVRIVAG NEYLEERNVA WVGQLYFPEV VSRGVLNAKA YRGRSSLPVC
NNDDAYYANM GGEESTLTVW PIGRDSHEDG YFGHLTIGID TFAVSSQIKP EDFDKYTV