Gene Pfl01_4292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4292 
Symbol 
ID3713990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4848049 
End bp4848822 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content59% 
IMG OID 
Productlysine-arginine-ornithine-binding periplasmic protein 
Protein accessionYP_350020 
Protein GI77460513 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.887396 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAC TTGTGCTGCT TGGCGCCCTG GCACTGTCCG TGCTGTCCCT GCCGACATTC 
GCCGATGAAA AGCCTCTGAA AATCGGTATC GAAGCGGCTT ACCCTCCATT CGCCTCCAAA
GCGCCGGACG GCAGCATCGT CGGTTTCGAC TACGACATCG GCAACGCGCT GTGCGAAGAG
ATGAAGGTCA AGTGCCAGTG GGTCGAGCAA GAGTTCGACG GTCTGATCCC GGCACTGAAA
GTGCGCAAGA TCGACGCGAT CCTGTCGTCC ATGTCGATCA CTGACGACCG CAAGAAGTCC
GTGGACTTCA CCAACAAGTA CTACAACACC CCGGCCCGCC TCGTGATGAA GGAAGGCACT
CAGGTCAGCG AAGGTCTGGC TGAGCTCAAG GGCAAGAACA TCGGCGTGCA ACGTGGTTCG
ATCCACGAGC GTTTCGCCCG CGAAGTCCTG GCCCCGCTGG GTGCCGAGAT CAAGCCTTAT
GGTTCGCAGA ACGAAATCTA CCTCGACGTG GCCGCCGGCC GCCTCGACGG CACCGTGGCG
GACGCTACGC TGTTGAATGA CGGCTTCCTG AAAACCGACG CCGGCAAAGG CTTCGCGTTC
GTGGGTCCGG CGTTCACCGA CGTCAAATAC TTCGGCGACG GCGTAGGCAT CGCGGTACGC
AAGGGCGACG CCCTGAAAGA CAAGATCAAC ACCGCCATCG CGGCCATCCG CGAGAACGGC
AAGTACAAGG CAATCCAGGA CAAGTACTTC GACTTCGACA TTTACGGCAA GTAA
 
Protein sequence
MKKLVLLGAL ALSVLSLPTF ADEKPLKIGI EAAYPPFASK APDGSIVGFD YDIGNALCEE 
MKVKCQWVEQ EFDGLIPALK VRKIDAILSS MSITDDRKKS VDFTNKYYNT PARLVMKEGT
QVSEGLAELK GKNIGVQRGS IHERFAREVL APLGAEIKPY GSQNEIYLDV AAGRLDGTVA
DATLLNDGFL KTDAGKGFAF VGPAFTDVKY FGDGVGIAVR KGDALKDKIN TAIAAIRENG
KYKAIQDKYF DFDIYGK