Gene Pfl01_4289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4289 
Symbol 
ID3713987 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4845447 
End bp4846571 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content64% 
IMG OID 
Productsuccinylglutamate desuccinylase/aspartoacylase 
Protein accessionYP_350017 
Protein GI77460510 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACGCA TCGACCACGT TCTGCCGTGG AGCCACCTGG GCAGCGAGCG CCGGATTTCG 
GTGTTCAGCT TTGGAAATAG AGAGCGCAGT GGTGGGCGCA AGGCCTACAT CCAGGCCAGC
CTCCACGCCG ACGAACTGCC CGGCATGCGC ACTGCCTGGG AACTGAAAAA GCGCCTCGGT
GAACTCGAAG CCAAGGGCCT GCTCAACGGC GTCATCGAAC TGGTTCCTGT GGCCAACCCG
CTGGGTCTTG GCCAGTTGCT GCAAGGCAAT CACCAGGGTC GTTTCGAGGC CGGCAGCGGC
AAGAATTTCA ACCGTGATTT CGTCGAGCTC AGCGCCCCCG TGGCCGCCAG GCTGGAAGGA
CAACTCGGTG ATGATCCGCA CGCCAACATC CGTCTGATCC GTCAGGCGAT GGCCGACCAT
CTGGCCGAAT TACCTGAGGC GAGTAGCCAG TTGCAAGGCA TGCAGCGCAT CCTGCTGCAA
CACGCCGCCA CCGCCGATGT GGTGCTGGAT CTGCATTGCG ATTGTGAAGC CGCGCTGCAC
ATGTACGCCT TGCCGCAGCA CTGGCCGCAG TGGCGTTCGC TCGCCGCGCA CCTGGATGTG
AAGGTCGGCC TGCTGGCAGA AGATTCCGGC GGCAGCTCGT TCGACGAAGC CTGTTCGCTG
CCGTGGCTGC GTCTGTCGCG CCTGTTCCCG GATGCGCAGA TTCCACTGGC GTGCCTGGCA
ACCACTGTTG AACTCGGTGG TCAGGCTGAC ACCACGCCGG CGCAGGCCGA AGCCTGGGCC
GAAGGCATTC TGGCGTTCCT CGCCGAGCAG GGCCTGATCC GTGGCGAGTG GCCGAGCGCG
GCGCACGAAC CATGCGAAGG CATGCCGTTC GAAGGCACCG AAATGCTCCT GCCGCCGCAT
CCCGGCGTGG TGAGTTTTCT GCGCAAGCCC GGCGAGTGGG TTGAAGCCGG TGACAAGATT
TTCGAAGTGA TCGATCCGCT GTCGGATCGG GTCAGCACGG TGTGTGCTGG TACGTCCGGG
GTGCTGTTTG CCATTGAGCG GCTGCGTTAC GCCCAACCCG GTTTCTGGCT GGCCAAAGTG
GCGGGGCGCG ATGCGCTGCG CGACGGCCCT TTGCTCAACG ACTGA
 
Protein sequence
MERIDHVLPW SHLGSERRIS VFSFGNRERS GGRKAYIQAS LHADELPGMR TAWELKKRLG 
ELEAKGLLNG VIELVPVANP LGLGQLLQGN HQGRFEAGSG KNFNRDFVEL SAPVAARLEG
QLGDDPHANI RLIRQAMADH LAELPEASSQ LQGMQRILLQ HAATADVVLD LHCDCEAALH
MYALPQHWPQ WRSLAAHLDV KVGLLAEDSG GSSFDEACSL PWLRLSRLFP DAQIPLACLA
TTVELGGQAD TTPAQAEAWA EGILAFLAEQ GLIRGEWPSA AHEPCEGMPF EGTEMLLPPH
PGVVSFLRKP GEWVEAGDKI FEVIDPLSDR VSTVCAGTSG VLFAIERLRY AQPGFWLAKV
AGRDALRDGP LLND