Gene Pfl01_4262 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4262 
Symbol 
ID3717853 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4808907 
End bp4810346 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content55% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_349990 
Protein GI77460483 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.109505 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.779454 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGCAAGG ATTACCCTGC GCGGCGGTTC ACACCTTCCA ACGGCAAAGG ATTCATCGTG 
TACATCAAGG GACGCTACAT CGTGTCGGTC TGTGCGCTGC TGTTTTTTCA GCAGGCAGTG
GCGAGCGGAA TGGACTGCAC AAAGGCGGCG AGTGCTGTGG AGAAGGCGAT TTGCGCGGAC
AAGCCTTTGT ATGAGCTGGA TGCGCAGATG GGGGCGGCTT ATCGGAAGCT TATGAAAGCT
GCCCCGGCGC AGGCCGAAGT GAAAAACGCC CAGCGCCAGT GGCTGAAGGA GCGTGATCGA
TGTGGCGAGG AGGTCAGTTG CCTGAACCAG CGTTATCAGG ATCGTTTGCA GGTGTTGCAC
GCGCAGTGGA TCGACGCGGT GGCCTACAAA CCGGACGAGA TCGATAAACA GGTCATGGAG
GATCTGCAGC AACGGATCCG GGAGATGAGC AAGGAGAACC CGGAGTTTGC GCTGGAGCGG
GCGCTGGATT CTCTCTCAAC CGACGACGGC GAAACTTCGT TCTCCGGTGA TCCCAGCGAC
GACAACACTT ACGATCAGAC CTTGTTTCCC AAAAGCATTC CCAAGGGTGT AACCCCGAAT
GAATGGAAGG CGCTTAAAGC TTCCGGTCTT GACGCTGATG CCGAGCAGGG CCAGGCGAAT
TACTCATTGA TAGACCTGAA CGGCGACGGT CAACGGGATC TGATCGTTTC AACCTACACC
GGTGGTACAG GCCTCTTCAG CTTCTATGAA ACCTTCCGTC GCGATGGAGA ACGGTTCACC
AGAAGGCTGG CTCCCTATGA TCCGGACGCC AGCGCCGGCA GCTCGTTGTT CTCCACCAAT
GATCGAGGCG CCAACCAATC GGCAGCCTGG ATCAAATCTC ATGGAAGGAT GTATCTCGCC
TATCGCAACG GGTCATACGG TGTCGATCAG ATCTACCTGC TCAATCCCCT GAAGATCAAC
AGCCAAATAC CAACAGTGAC GGTTCGGTAT GACTACAAGT TGATCGTGCC GAGCAATCAA
TACTCCGAGG AAAGCAGTAC CAGCTACGTA CTGGACCCAG TCTTGCGAAA GACTCTCATA
AAAGCCCTGA CCCAATCGGG TGCGGGTAAA CCTCAACAAC CCAGCCAACA CAAAGGCCCC
CTCTGCCCCA TTCCTGCATC GGGCTCGGGT GACGATGATT ATTACAGTTA CGGCGCAGGT
TACTACGCAG TAGAAACCGT CATGGACTTG CCAGTTTTCA TCGACAACGA GTGCTTCATC
GCAAGGCTGA ACAATTGGTT TGGTAGTTAC AGCGAGAAAG ACGGATTGCC CGCCTTGCTG
ACTTTGCGCA AGCCTGGGTC TCAGGATCCC GAACGGGGCT TCTCAGTCAA CGGCCGCCGA
CATTTCACGA ACGTCACAAC CTCGATTGGA AAGGCAGAGG GTGGAGCTGA AATTTTCTAG
 
Protein sequence
MRKDYPARRF TPSNGKGFIV YIKGRYIVSV CALLFFQQAV ASGMDCTKAA SAVEKAICAD 
KPLYELDAQM GAAYRKLMKA APAQAEVKNA QRQWLKERDR CGEEVSCLNQ RYQDRLQVLH
AQWIDAVAYK PDEIDKQVME DLQQRIREMS KENPEFALER ALDSLSTDDG ETSFSGDPSD
DNTYDQTLFP KSIPKGVTPN EWKALKASGL DADAEQGQAN YSLIDLNGDG QRDLIVSTYT
GGTGLFSFYE TFRRDGERFT RRLAPYDPDA SAGSSLFSTN DRGANQSAAW IKSHGRMYLA
YRNGSYGVDQ IYLLNPLKIN SQIPTVTVRY DYKLIVPSNQ YSEESSTSYV LDPVLRKTLI
KALTQSGAGK PQQPSQHKGP LCPIPASGSG DDDYYSYGAG YYAVETVMDL PVFIDNECFI
ARLNNWFGSY SEKDGLPALL TLRKPGSQDP ERGFSVNGRR HFTNVTTSIG KAEGGAEIF