Gene Pfl01_4241 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4241 
Symbol 
ID3717819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4783358 
End bp4783963 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content60% 
IMG OID 
Productouter membrane protein H1 
Protein accessionYP_349969 
Protein GI77460462 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.186176 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCGTT TAAATAAACT GCTGCTGGCT TTTACCGTAA TGAGCGCCAG TATCGCGGCC 
CACGCCGACA CCTCCAGCAA CTTCGCCGGC CTGACCTTTG GCCAGACCAG CGACAAGATC
AAAAAATCCA ACGCCCTGAA CGACAACCTC GGCCACCCGG ACGCCACTGC GGCCATCGAC
GGCAACAACA CCTACGGCCT GCGCCTGGGT CAGCAAAACA GCCAGGGTCG CTACTACGCC
ACCTACGACA ACGTGTCGGG CTCGCACAAT GGCATTAAAC TGCGCCAGGA AAACCTGCTG
GGCAGCTACG ATCTGTTCTA CCCGGTGGGT AGCAGCACCA AGCTGTTCGG CGGTGCCACG
GCCGGTCTGA CCAAGTTGAC CCAGGATTCG CCGGGCTACA GCCGCGACAG CGACATCGGT
TACGCGGTCG GCGGTCAGTT CGGTGTGCTG CAGCAAGTCT CGCAGAACAC CTCGGTCGAA
CTCGGTTACC GTTACCTGCG CAGCAACGCC AGCACCGAGA TGAAAGAGAG CGGCGGCAGC
AAGCAAGGCT CGCTGGACTT GACCAGCAGC GCCCAGACTT ACCTGTCGGC CAACTACGCT
TTCTAA
 
Protein sequence
MTRLNKLLLA FTVMSASIAA HADTSSNFAG LTFGQTSDKI KKSNALNDNL GHPDATAAID 
GNNTYGLRLG QQNSQGRYYA TYDNVSGSHN GIKLRQENLL GSYDLFYPVG SSTKLFGGAT
AGLTKLTQDS PGYSRDSDIG YAVGGQFGVL QQVSQNTSVE LGYRYLRSNA STEMKESGGS
KQGSLDLTSS AQTYLSANYA F