Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4241 |
Symbol | |
ID | 3717819 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 4783358 |
End bp | 4783963 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | outer membrane protein H1 |
Protein accession | YP_349969 |
Protein GI | 77460462 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.186176 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCGTT TAAATAAACT GCTGCTGGCT TTTACCGTAA TGAGCGCCAG TATCGCGGCC CACGCCGACA CCTCCAGCAA CTTCGCCGGC CTGACCTTTG GCCAGACCAG CGACAAGATC AAAAAATCCA ACGCCCTGAA CGACAACCTC GGCCACCCGG ACGCCACTGC GGCCATCGAC GGCAACAACA CCTACGGCCT GCGCCTGGGT CAGCAAAACA GCCAGGGTCG CTACTACGCC ACCTACGACA ACGTGTCGGG CTCGCACAAT GGCATTAAAC TGCGCCAGGA AAACCTGCTG GGCAGCTACG ATCTGTTCTA CCCGGTGGGT AGCAGCACCA AGCTGTTCGG CGGTGCCACG GCCGGTCTGA CCAAGTTGAC CCAGGATTCG CCGGGCTACA GCCGCGACAG CGACATCGGT TACGCGGTCG GCGGTCAGTT CGGTGTGCTG CAGCAAGTCT CGCAGAACAC CTCGGTCGAA CTCGGTTACC GTTACCTGCG CAGCAACGCC AGCACCGAGA TGAAAGAGAG CGGCGGCAGC AAGCAAGGCT CGCTGGACTT GACCAGCAGC GCCCAGACTT ACCTGTCGGC CAACTACGCT TTCTAA
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Protein sequence | MTRLNKLLLA FTVMSASIAA HADTSSNFAG LTFGQTSDKI KKSNALNDNL GHPDATAAID GNNTYGLRLG QQNSQGRYYA TYDNVSGSHN GIKLRQENLL GSYDLFYPVG SSTKLFGGAT AGLTKLTQDS PGYSRDSDIG YAVGGQFGVL QQVSQNTSVE LGYRYLRSNA STEMKESGGS KQGSLDLTSS AQTYLSANYA F
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