| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_4236 |
|---|
| Symbol | |
|---|
| ID | 3717814 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 4777305 |
|---|
| End bp | 4778639 |
|---|
| Gene Length | 1335 bp |
|---|
| Protein Length | 444 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | |
|---|
| Product | C4-dicarboxylate transporter DctA |
|---|
| Protein accession | YP_349964 |
|---|
| Protein GI | 77460457 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.825955 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGACTC GTCAGCCACT GTACAAATCC CTGTATTTCC AGGTGATCGT CGCAATCTGT
ATCGGTATTG CGCTCGGCCA CTACTACCCG CAGTTCGGCG TGGCCGTAAA GCCGCTGGGT
GACGGGTTCA TCAAACTGAT CAAAATGATC ATCGCCCCGA TCATCTTCTG CACCGTGGTC
AGCGGCATCG CCGGCATGCA GAACATGAAA TCGGTCGGCA AGACCGGCGG CTACGCACTC
CTGTACTTCG AAATCGTTTC GACCATCGCA CTGCTGGTGG GCCTGATCGT GGTCAACATC
GTGCAACCGG GCAACGGCAT GCACATCGAC GTCAGCACCC TCGACGCCTC GAAAGTCGCG
ACCTATGTTG CTCAAGGCGC AGACCAGAGC GTTGTCGGCT TCCTGCTCAA CGTGATCCCG
ACCACCATCG TCGGCGCGTT CGCCACCGGT GACATCCTGC AAGTGCTGAT GTTCTCGGTG
ATCTTCGGTT TCGCCCTGCA CCGCCTGGGT GCCTACGGCA AGCCGATCCT GGACTTCATC
GATCGCTTCG CTCACGTGAT GTTCAACATC ATCAACATGA TCATGAAGCT CGCGCCCATC
GGTGCCTTCG GTGCGATGGC GTTCACCATC GGTGCCTACG GTGTCGGCTC GCTGGTACAG
CTGGGTCAAC TGATGATCTG CTTCTACATC ACTTGCCTGG CGTTCATCCT GATCGTGCTC
GGCGGTATCG CCCGCATGCA CGGTTTCAGC GTGCTGAAAA TGATCCGCTA CATCCGTGAA
GAACTGCTGA TCGTGCTGGG TACTTCCTCT TCGGAATCGG TACTGCCACG CATGCTGATC
AAGATGGAGC GTCTGGGCGC GAAGAAATCG GTGGTAGGTC TGGTGATCCC GACCGGCTAC
TCGTTCAACC TCGACGGCAC CGCAATCTAC CTGACCATGG CGGCCGTGTT CATCGCTCAG
GCGACCGACA CCCACATGGA CATCACTCAC CAGATCACCC TGCTGGTGGT GTTGCTGCTG
TCCTCCAAAG GCGCCGCCGG TGTGACCGGT TCGGGCTTCA TCGTGCTGGC GGCCACCCTG
TCGGCGGTAG GTCACCTGCC GGTGGCCGGT CTGGCGCTGA TCCTGGGTAT CGACCGCTTC
ATGTCCGAAG CCCGTGCCCT GACCAACCTG GTCGGCAACG CCGTTGCCAC CATCGTTGTG
GCCAAGTGGG TCAAGGAGCT GGACACCGAC GTGCTGGACG CCGAGCTGGC CTCGGGCGGT
CGCGGTATCG CCGATACCCG TCCTGAAGAT GACCTGGGCG TGGCCGAAGG CCCGACCCCG
AGCAATGTGA AGTAA
|
|---|
| Protein sequence | MTTRQPLYKS LYFQVIVAIC IGIALGHYYP QFGVAVKPLG DGFIKLIKMI IAPIIFCTVV
SGIAGMQNMK SVGKTGGYAL LYFEIVSTIA LLVGLIVVNI VQPGNGMHID VSTLDASKVA
TYVAQGADQS VVGFLLNVIP TTIVGAFATG DILQVLMFSV IFGFALHRLG AYGKPILDFI
DRFAHVMFNI INMIMKLAPI GAFGAMAFTI GAYGVGSLVQ LGQLMICFYI TCLAFILIVL
GGIARMHGFS VLKMIRYIRE ELLIVLGTSS SESVLPRMLI KMERLGAKKS VVGLVIPTGY
SFNLDGTAIY LTMAAVFIAQ ATDTHMDITH QITLLVVLLL SSKGAAGVTG SGFIVLAATL
SAVGHLPVAG LALILGIDRF MSEARALTNL VGNAVATIVV AKWVKELDTD VLDAELASGG
RGIADTRPED DLGVAEGPTP SNVK
|
|---|
| |