Gene Pfl01_4123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4123 
Symbol 
ID3714965 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4665208 
End bp4666356 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content62% 
IMG OID 
Productgalactonate dehydratase 
Protein accessionYP_349851 
Protein GI77460344 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0234002 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.927238 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCA CCAAACTCAC CACCTTCATC GTCCCGCCGC GCTGGTGCTT CCTGAAAGTC 
GAAACCGACG AAGGCGTGAC CGGTTGGGGC GAGCCCGTGG TCGAGGGCCG CGCCCACACG
GTCGCTGCTG CGGTTGAGGA ATTGTCCGAC TACCTGATCG GCAAAGACCC ACGCAATATC
GAAGACATCT GGACCGTGCT GTATCGCGGT GGCTTCTACC GAGGCGGCGC GATCCACATG
AGCGCGCTGG CCGGTATCGA TCAGGCGCTG TGGGACATCA AGGGCAAGGC CCTCGGTGTA
TCGGTCAGCG ATCTGCTCGG CGGTCAGGTG CGGGACAAGA TCCGCGTGTA TTCGTGGATC
GGCGGCGACC GCCCGGCGGA CACTGCGCGG GCCGCGAAAG AGGCGGTGGG CCGAGGTTTT
ACGGCGGTGA AAATGAACGG CACCGAGGAA CTGCAATTCC TCGATACCTT CGAAAAGGTC
GATCTGGCCC TGGCCAACGT TGCCGCCGTG CGCGATGCGG TCGGGCCGAA CGTCGGCATC
GGCGTCGACT TCCATGGCCG GGTGCACAAA CCCATGGCCA AGGTGCTGAT GAAGGAACTC
GACCCGTACA AACTGATGTT CATCGAAGAG CCGGTGCTCA GCGAAAACTA CGAAGCGCTG
AAAGAACTGG CTCCGCTGAC CAGCACCCCG ATTGCCCTCG GTGAGCGGCT GTTTTCGCGC
TGGGACTTTA AACGGGTGTT GAGCGAAGGT TACGTCGACA TCATCCAGCC GGACGCGTCC
CACGCCGGCG GCATCACCGA GACCCGCAAG ATCGCCAACA TGGCCGAAGC CTACGACGTG
GCGCTGGCAC TGCATTGCCC GCTGGGGCCG ATTGCACTGG CGGCGTGTCT GCAACTGGAC
GCCGCTTGTT ACAACGCGTT TATCCAGGAG CAGAGCCTGG GCATCCATTA CAACGAGAGC
AATGACTTGC TCGATTATGT GAAGGATCCG CGGGTGTTCG ACTACGACAA GGGCTTCGTG
AAAATCCCGA ACGGCCCGGG CCTGGGGATC GAGATCAACG AGGAATACGT GATCGAACGC
GCGGCGGTCG GTCATCGCTG GCGCAACCCG ATCTGGCGGC ATGCCGATGG CAGTTTTGCC
GAGTGGTGA
 
Protein sequence
MKITKLTTFI VPPRWCFLKV ETDEGVTGWG EPVVEGRAHT VAAAVEELSD YLIGKDPRNI 
EDIWTVLYRG GFYRGGAIHM SALAGIDQAL WDIKGKALGV SVSDLLGGQV RDKIRVYSWI
GGDRPADTAR AAKEAVGRGF TAVKMNGTEE LQFLDTFEKV DLALANVAAV RDAVGPNVGI
GVDFHGRVHK PMAKVLMKEL DPYKLMFIEE PVLSENYEAL KELAPLTSTP IALGERLFSR
WDFKRVLSEG YVDIIQPDAS HAGGITETRK IANMAEAYDV ALALHCPLGP IALAACLQLD
AACYNAFIQE QSLGIHYNES NDLLDYVKDP RVFDYDKGFV KIPNGPGLGI EINEEYVIER
AAVGHRWRNP IWRHADGSFA EW