Gene Pfl01_4062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4062 
Symbol 
ID3714885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4586311 
End bp4587438 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content57% 
IMG OID 
ProductDegT/DnrJ/EryC1/StrS aminotransferase 
Protein accessionYP_349790 
Protein GI77460283 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.204393 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGATTC AGCTGTTCGT ACCAAAATTC CGTATTGATG AATGCCTCGC TGCCATTCGC 
GAATGCCTCG AAAAAGGCTG GACCGGTCTC GGCTTCAAAA CCGCGACCAT GGAAGAGGAA
TGGAAAACCT ATACTGGTTT GCCGAATGCC CACTTCCTGA GCTCCAACAC CGTTGGCCTG
CACCTGGCAG TAGAACTGTA CAAGACCAAG TTCGGCTGGA GCGATGAAGA TGAAGTCATC
ACCACGCCAC TGACCTTCAT TTCGACCAAC CACGCCATTC TGTATGCGGG CATGAAGCCT
GTATTCGCGG ACGTCGACGC ATCGCTGTGC CTTGACCCGG AAAGCGTTAT CGAGCGCATC
ACGCCAAAAA CCAAGGCTCT GATCTTTGTC GGCATCGGTG GCAACATCGG CCAGTACCAG
AAAATCGTCG AAATCTGCAA AGAGCACGAC ATCAAGCTGA TCCTGGATGC CGCCCACATG
GCAGGCACTC GCGTCAACGG CAAACATGTT GGCCAAGAAG CCGACTGCGT CGTGTTCAGC
TTCCAGGCTG TGAAAAACCT GCCGACCGCC GACTCCGGCA TGATCTGCTT CAAGAGTAAA
GAAGACGACG AGCGGGTTCG CAAGCTGAGC TGGCTGGGCA TCAACAAAGA CACCTTCGCT
CGCACCGCCG CACAAGGCGC GTACAAGTGG ATGTACGACG TTGAAGAGCT GGGCTACAAA
TACCACGGCA ACTCGATCAT GGCGGCCATG GGCCTGGTTC AGCTCAAATA CCTGGACCTG
GACAACGCCT ACCGTCGTCA GCTGGCGAGC TGGTACCGTG AGAACCTGGC CGGCCAGACC
AAGATCGACA TCGTCAACGT AACACCAGGT TGCGAGTCCT CGACCCACCT GCTGCAGATT
CGCGTCAAGG ATCGCGATGC TCTGATGCTC GCGCTGAACG AGCACCAGAT CTACCCGGGC
GTGCACTACC GCGATAACAC CGAGTACTCG ATGTATTCGT TCGGTGCCGG CACCTGCCCG
AATGCAGCCA AGGCCAGCCA GGAAATCCTG TCGCTGCCGA TGCATCTGGG GCTGACCCGT
GCCGACGTCG ACACCGTGTG CGAACTGCTG ATCCGCTACG CAAAATGA
 
Protein sequence
MSIQLFVPKF RIDECLAAIR ECLEKGWTGL GFKTATMEEE WKTYTGLPNA HFLSSNTVGL 
HLAVELYKTK FGWSDEDEVI TTPLTFISTN HAILYAGMKP VFADVDASLC LDPESVIERI
TPKTKALIFV GIGGNIGQYQ KIVEICKEHD IKLILDAAHM AGTRVNGKHV GQEADCVVFS
FQAVKNLPTA DSGMICFKSK EDDERVRKLS WLGINKDTFA RTAAQGAYKW MYDVEELGYK
YHGNSIMAAM GLVQLKYLDL DNAYRRQLAS WYRENLAGQT KIDIVNVTPG CESSTHLLQI
RVKDRDALML ALNEHQIYPG VHYRDNTEYS MYSFGAGTCP NAAKASQEIL SLPMHLGLTR
ADVDTVCELL IRYAK