Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4062 |
Symbol | |
ID | 3714885 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 4586311 |
End bp | 4587438 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | |
Product | DegT/DnrJ/EryC1/StrS aminotransferase |
Protein accession | YP_349790 |
Protein GI | 77460283 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.204393 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGATTC AGCTGTTCGT ACCAAAATTC CGTATTGATG AATGCCTCGC TGCCATTCGC GAATGCCTCG AAAAAGGCTG GACCGGTCTC GGCTTCAAAA CCGCGACCAT GGAAGAGGAA TGGAAAACCT ATACTGGTTT GCCGAATGCC CACTTCCTGA GCTCCAACAC CGTTGGCCTG CACCTGGCAG TAGAACTGTA CAAGACCAAG TTCGGCTGGA GCGATGAAGA TGAAGTCATC ACCACGCCAC TGACCTTCAT TTCGACCAAC CACGCCATTC TGTATGCGGG CATGAAGCCT GTATTCGCGG ACGTCGACGC ATCGCTGTGC CTTGACCCGG AAAGCGTTAT CGAGCGCATC ACGCCAAAAA CCAAGGCTCT GATCTTTGTC GGCATCGGTG GCAACATCGG CCAGTACCAG AAAATCGTCG AAATCTGCAA AGAGCACGAC ATCAAGCTGA TCCTGGATGC CGCCCACATG GCAGGCACTC GCGTCAACGG CAAACATGTT GGCCAAGAAG CCGACTGCGT CGTGTTCAGC TTCCAGGCTG TGAAAAACCT GCCGACCGCC GACTCCGGCA TGATCTGCTT CAAGAGTAAA GAAGACGACG AGCGGGTTCG CAAGCTGAGC TGGCTGGGCA TCAACAAAGA CACCTTCGCT CGCACCGCCG CACAAGGCGC GTACAAGTGG ATGTACGACG TTGAAGAGCT GGGCTACAAA TACCACGGCA ACTCGATCAT GGCGGCCATG GGCCTGGTTC AGCTCAAATA CCTGGACCTG GACAACGCCT ACCGTCGTCA GCTGGCGAGC TGGTACCGTG AGAACCTGGC CGGCCAGACC AAGATCGACA TCGTCAACGT AACACCAGGT TGCGAGTCCT CGACCCACCT GCTGCAGATT CGCGTCAAGG ATCGCGATGC TCTGATGCTC GCGCTGAACG AGCACCAGAT CTACCCGGGC GTGCACTACC GCGATAACAC CGAGTACTCG ATGTATTCGT TCGGTGCCGG CACCTGCCCG AATGCAGCCA AGGCCAGCCA GGAAATCCTG TCGCTGCCGA TGCATCTGGG GCTGACCCGT GCCGACGTCG ACACCGTGTG CGAACTGCTG ATCCGCTACG CAAAATGA
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Protein sequence | MSIQLFVPKF RIDECLAAIR ECLEKGWTGL GFKTATMEEE WKTYTGLPNA HFLSSNTVGL HLAVELYKTK FGWSDEDEVI TTPLTFISTN HAILYAGMKP VFADVDASLC LDPESVIERI TPKTKALIFV GIGGNIGQYQ KIVEICKEHD IKLILDAAHM AGTRVNGKHV GQEADCVVFS FQAVKNLPTA DSGMICFKSK EDDERVRKLS WLGINKDTFA RTAAQGAYKW MYDVEELGYK YHGNSIMAAM GLVQLKYLDL DNAYRRQLAS WYRENLAGQT KIDIVNVTPG CESSTHLLQI RVKDRDALML ALNEHQIYPG VHYRDNTEYS MYSFGAGTCP NAAKASQEIL SLPMHLGLTR ADVDTVCELL IRYAK
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