Gene Pfl01_3978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3978 
Symbol 
ID3714004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4506702 
End bp4507592 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content63% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_349706 
Protein GI77460199 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATTCCC GATTGAATGC TTTTCTTGAG CGCGCCGAGT CGGTTCTGGC GCGGATCGAA 
CCGCTATTGC CGGCTCCACG CCCGGTCATC GACTGGGGCA CCTGCCTCGC CGCACGCTGG
CAGCGTGACG GGCGCAGCGG TTATCTGCTG CCGCTGGAAG TCAGCCTCGA CATGCGCCTG
TCGGACTTGA TCGGCGTCGA CCGCCAGCTG GAGCAACTGG GCCGCAACAC TCAGCAATTT
CTCGACGGCA TGCCGGCCAA CCATGCGCTG CTGTGGGGTT CGCGCGGTAC CGGTAAATCG
TCGCTGGTCC GCGCGCTGCT GGCTGAACAC GCCAAGGCCG GTTTGCGTCT GATCGAAATC
GAGCGCGATC ACCTGGCGGA CCTGCCACGG GTGGTGGAGC AGATCGCCAA GCTGCCGCAG
CGCTTTGTGC TGTTCTGCGA CGACCTCTCG TTCGAGTCCG GCGAAGGCGA CTACCGCGTA
CTGAAAAGCG TGCTGGACGG CTCGCTCGAA CAGGCGCCGG ACAACGTGTT GCTTTACGCC
ACCTCCAACC GTCGTCATCT GGTGCCGGAA AAGGAGAGCG ACAACGAAAA CTGGAAGCGC
GTCGATGGTG AGCTGCATCC GAGCGAAGCG GTGGAAGACA AGATCGCGCT GTCGGATCGC
TTCGGCCTGT GGCTGTCGTT CTATCCGTTT ACCCAGGAGC ATTTCCTCAA CGTCGTCGAG
CACTGGATCG GCCAGTTGGC CGCCAAGGCA GGCTTGAGCT GGGAACGCGA CGAACAACTG
GACATCCTCG CCGTGCGCTG GGCAACCGGC CGTGGCAACC GCAACGGACG TTGCGCTTAC
CAATTCGCCC GTTACTGGGT GGGACTGAAA TTGTTGGAGC ACAAGGCATG A
 
Protein sequence
MDSRLNAFLE RAESVLARIE PLLPAPRPVI DWGTCLAARW QRDGRSGYLL PLEVSLDMRL 
SDLIGVDRQL EQLGRNTQQF LDGMPANHAL LWGSRGTGKS SLVRALLAEH AKAGLRLIEI
ERDHLADLPR VVEQIAKLPQ RFVLFCDDLS FESGEGDYRV LKSVLDGSLE QAPDNVLLYA
TSNRRHLVPE KESDNENWKR VDGELHPSEA VEDKIALSDR FGLWLSFYPF TQEHFLNVVE
HWIGQLAAKA GLSWERDEQL DILAVRWATG RGNRNGRCAY QFARYWVGLK LLEHKA