Gene Pfl01_3943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3943 
Symbol 
ID3715247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4469479 
End bp4470312 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content59% 
IMG OID 
Productperiplasmic binding protein 
Protein accessionYP_349671 
Protein GI77460164 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.929168 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGATC GGTACTTTTT CGGGGAGTGG GGTGTTTTGA AGTCTTCGCC AATTCGGATG 
GCCGCCGGGC TGATGCTCGC AGCGCTGGCT GCATTATGGG TATTGCCCGC TCCGGCGGCG
CAAGTGGTTC GGGTGGGCGC GGCGCATTTT CCGCCCTACA CCATTCGCCC GGAAAACGGC
GCCGACACCG GCCTGCTGCC GGAACTGGTC GCGGCTTTGA ACAGCGCCCA GAGCGACTAT
CGTTTCGAAC TGGTGCCCAC CTCGATCCCT CGCCGGTTCG GTGATTTCAA GGATGGCCGC
ACCGACATGG CAATCTTCGA AAATCCGGAG TGGGGCTGGA AGGACATCCC CCACACCACC
GTCGACATGG GTCTTGAGGA CGCGGAGATT TTCGTCGCGC AGAACAAACC CGGACGCCAG
CAGAATTACT TCGCCGATCT CAAGGGCAAA CGGCTGGCGC TGTACAGCGG TTATCACTAT
GAATTCGCCA ATTTCAACGC CGATCCCAAG TACCTCGCAG AAACCTACAG CGCCACGCTG
ACCTATTCCC ACGACAGCAA CCTGCTGATG GTCTTGCGCG GGCGCGCGGA CATTGCCTTG
GTGACTCGCT CGTATCTGTT CGATTACTTG CTGCGCAACG AAAAGGTGCG TGACGAGTTG
CTGGTGTCCC AGCGTATCGA CCAGATCTAC CACCACTATG CGATTCTCAG TCCGAAGGCG
CCGATCACCG GCGAAGCGTT CGGCAGGCTG CTGCAAGGCC TGCGCGACAA CGGGCAGATG
CTGAAGATCT TCGATCCGTA CAAGATTGCG GTGGTGCCGG TAGCGCATCA ATGA
 
Protein sequence
MHDRYFFGEW GVLKSSPIRM AAGLMLAALA ALWVLPAPAA QVVRVGAAHF PPYTIRPENG 
ADTGLLPELV AALNSAQSDY RFELVPTSIP RRFGDFKDGR TDMAIFENPE WGWKDIPHTT
VDMGLEDAEI FVAQNKPGRQ QNYFADLKGK RLALYSGYHY EFANFNADPK YLAETYSATL
TYSHDSNLLM VLRGRADIAL VTRSYLFDYL LRNEKVRDEL LVSQRIDQIY HHYAILSPKA
PITGEAFGRL LQGLRDNGQM LKIFDPYKIA VVPVAHQ