Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3943 |
Symbol | |
ID | 3715247 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 4469479 |
End bp | 4470312 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | |
Product | periplasmic binding protein |
Protein accession | YP_349671 |
Protein GI | 77460164 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.929168 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATGATC GGTACTTTTT CGGGGAGTGG GGTGTTTTGA AGTCTTCGCC AATTCGGATG GCCGCCGGGC TGATGCTCGC AGCGCTGGCT GCATTATGGG TATTGCCCGC TCCGGCGGCG CAAGTGGTTC GGGTGGGCGC GGCGCATTTT CCGCCCTACA CCATTCGCCC GGAAAACGGC GCCGACACCG GCCTGCTGCC GGAACTGGTC GCGGCTTTGA ACAGCGCCCA GAGCGACTAT CGTTTCGAAC TGGTGCCCAC CTCGATCCCT CGCCGGTTCG GTGATTTCAA GGATGGCCGC ACCGACATGG CAATCTTCGA AAATCCGGAG TGGGGCTGGA AGGACATCCC CCACACCACC GTCGACATGG GTCTTGAGGA CGCGGAGATT TTCGTCGCGC AGAACAAACC CGGACGCCAG CAGAATTACT TCGCCGATCT CAAGGGCAAA CGGCTGGCGC TGTACAGCGG TTATCACTAT GAATTCGCCA ATTTCAACGC CGATCCCAAG TACCTCGCAG AAACCTACAG CGCCACGCTG ACCTATTCCC ACGACAGCAA CCTGCTGATG GTCTTGCGCG GGCGCGCGGA CATTGCCTTG GTGACTCGCT CGTATCTGTT CGATTACTTG CTGCGCAACG AAAAGGTGCG TGACGAGTTG CTGGTGTCCC AGCGTATCGA CCAGATCTAC CACCACTATG CGATTCTCAG TCCGAAGGCG CCGATCACCG GCGAAGCGTT CGGCAGGCTG CTGCAAGGCC TGCGCGACAA CGGGCAGATG CTGAAGATCT TCGATCCGTA CAAGATTGCG GTGGTGCCGG TAGCGCATCA ATGA
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Protein sequence | MHDRYFFGEW GVLKSSPIRM AAGLMLAALA ALWVLPAPAA QVVRVGAAHF PPYTIRPENG ADTGLLPELV AALNSAQSDY RFELVPTSIP RRFGDFKDGR TDMAIFENPE WGWKDIPHTT VDMGLEDAEI FVAQNKPGRQ QNYFADLKGK RLALYSGYHY EFANFNADPK YLAETYSATL TYSHDSNLLM VLRGRADIAL VTRSYLFDYL LRNEKVRDEL LVSQRIDQIY HHYAILSPKA PITGEAFGRL LQGLRDNGQM LKIFDPYKIA VVPVAHQ
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