| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_3918 |
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| Symbol | |
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| ID | 3712555 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | + |
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| Start bp | 4435317 |
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| End bp | 4436420 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_349646 |
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| Protein GI | 77460139 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.84668 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACTGC TGACCCTGCC GCCTTCACCC GCCCTGGCCA CCTCAATCCG CGCCACCGCT
CAGGTTTTCG AAGACCCGAA ATCCCAGGCC CTGCTCGCGC ATTTGCAACA GGTCGCCCCG
AGCGAGGCCA GCGTGCTGAT CATCGGCGAA ACCGGCACCG GCAAAGAGTT GGTGGCGCGG
CATATCCATA ACCTGAGCAA CCGGCGCAAC CGGCCGTTCA TCGCGGTCAA CTGCGGGGCG
TTTTCCGAAT CGCTGGTGGA AGCCGAACTG TTCGGCCACG AAAAAGGCGC CTTCACCGGC
GCCCTCAGCG CCAAGGCCGG ATGGTTCGAA GAGGCGGATG GCGGCACCTT GTTCCTCGAT
GAAATCGGCG ATCTGCCGAT GGCCATTCAG GTCAAATTGC TGCGGGTGTT GCAGGAACGC
GAAGTGGTGC GCCTCGGATC GCGCAAGAGC ATTCCCATCG ATGTGCGGGT GCTGGCGGCA
ACCAACGTGC AACTGGAGAA AGCCATCAAC GCCGGGCATT TCCGCGAGGA TCTGTATTAC
CGGCTGAACG TAGTGAATCT GGAGCTGAGC CCGTTGCGCG ACCGCCCCGG CGACATCCTG
CCGCTGACCC GGCATTTCAT CGAGGCCTAC AGTCAGCGCC TGGGTTACGG ACGCGTCACC
ATCAGTCCCG GCGCCGAACA CAAGCTGCGC GGCTACAGTT GGCCGGGCAA TATCCGCGAA
CTGGAAAACG TCATCCATCA CACGCTGCTG ATCTGCCGTA ACGGCGTGAT CGAACGCGAC
GATCTGCGCC TGTCGAACCT GCGCATCGAC CGTCCCGACG ATCAGCACGC AACCGCCGAC
GACTCACCGG AAGCGCTGCT GGAACGCGCC TTCCAGAAAC TCTTCGAGCA ACAGGCCGGC
GCCCTGCATG AAAAAGTCGA AGACGCGTTG CTGCGCTCAG CCTATCGCTT CTGCCATTAC
AACCAGGTGC ACACCGCGTC CCTGCTCGGC CTGAGTCGCA ACGTCACCCG TACGCGGCTG
ATCAAGATCG GCGAACTGGC GGTGAACAAG CGCCGGCCCA CGGAAAACCT GCAAGGCGAG
CGCTTGATCC AGCTGTCGAT CTAA
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| Protein sequence | MQLLTLPPSP ALATSIRATA QVFEDPKSQA LLAHLQQVAP SEASVLIIGE TGTGKELVAR
HIHNLSNRRN RPFIAVNCGA FSESLVEAEL FGHEKGAFTG ALSAKAGWFE EADGGTLFLD
EIGDLPMAIQ VKLLRVLQER EVVRLGSRKS IPIDVRVLAA TNVQLEKAIN AGHFREDLYY
RLNVVNLELS PLRDRPGDIL PLTRHFIEAY SQRLGYGRVT ISPGAEHKLR GYSWPGNIRE
LENVIHHTLL ICRNGVIERD DLRLSNLRID RPDDQHATAD DSPEALLERA FQKLFEQQAG
ALHEKVEDAL LRSAYRFCHY NQVHTASLLG LSRNVTRTRL IKIGELAVNK RRPTENLQGE
RLIQLSI
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