Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3907 |
Symbol | |
ID | 3712269 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 4424401 |
End bp | 4425129 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | |
Product | Short-chain dehydrogenase/reductase SDR |
Protein accession | YP_349635 |
Protein GI | 77460128 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.180445 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAACA AGAAGGTCGT ATTGGTCGTC GGTGCAGGTG ATGCCACGGG CGGTGCCATC GCCAAACGGT TCGCCAGGGA AGGATTCATC GCTTGCGTAA CGCGGCGCAG CGCCGACAAA TTGCAGCCGT TGGTGGAAGC CATTCAGGCG GCCGGCGGCG AAGCACACGG CTTTGCCTGC GATGCGCGCA AGGAAGAAGA CGTCATTGCA CTGATTGAGG ATATCGAGAC GCGTCTCGGA CCAATTGAAG CATTCGTTTT CAACATCGGC GCCAACGTGC CCTGCAGCAT CCTCGAAGAA ACCGCCCGCA AGTATTTCAA GATCTGGGAA ATGGCCTGCT TCTCCGGGTT TCTCAATGCC CGGGAAGTCG CCAAACGGAT GGTGACCCGT AGCCGCGGCA CGATCCTGTT CACCGGCGCG ACTGCCGGAT TGCGCGGTGC CTCCGGCTTC GCCGCGTTTG CCGGAGCCAA GCACGGTATC CGGGCTCTGG CACAGAGCAT GGCCAGAGAG CTTGGCCCGA TGAACATTCA CGTCGCCCAC GTCGTGGTCG ACGGCGCCAT CGATACCGAT TTCATCCGCG ACAATTTCCC TGACAAATAC GCCACCAAGG ACCAGGAGGG CATTCTCAAT CCAGAGCATA TCGCCGAGAA CTACTGGTAT CTGCATAGCC AGCCACGGGA CGCCTGGACG TTCGAGCTGG ATCTGCGTCC GTGGAACGAA CGCTGGTAA
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Protein sequence | MNNKKVVLVV GAGDATGGAI AKRFAREGFI ACVTRRSADK LQPLVEAIQA AGGEAHGFAC DARKEEDVIA LIEDIETRLG PIEAFVFNIG ANVPCSILEE TARKYFKIWE MACFSGFLNA REVAKRMVTR SRGTILFTGA TAGLRGASGF AAFAGAKHGI RALAQSMARE LGPMNIHVAH VVVDGAIDTD FIRDNFPDKY ATKDQEGILN PEHIAENYWY LHSQPRDAWT FELDLRPWNE RW
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