Gene Pfl01_3907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3907 
Symbol 
ID3712269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4424401 
End bp4425129 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content59% 
IMG OID 
ProductShort-chain dehydrogenase/reductase SDR 
Protein accessionYP_349635 
Protein GI77460128 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.180445 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAACA AGAAGGTCGT ATTGGTCGTC GGTGCAGGTG ATGCCACGGG CGGTGCCATC 
GCCAAACGGT TCGCCAGGGA AGGATTCATC GCTTGCGTAA CGCGGCGCAG CGCCGACAAA
TTGCAGCCGT TGGTGGAAGC CATTCAGGCG GCCGGCGGCG AAGCACACGG CTTTGCCTGC
GATGCGCGCA AGGAAGAAGA CGTCATTGCA CTGATTGAGG ATATCGAGAC GCGTCTCGGA
CCAATTGAAG CATTCGTTTT CAACATCGGC GCCAACGTGC CCTGCAGCAT CCTCGAAGAA
ACCGCCCGCA AGTATTTCAA GATCTGGGAA ATGGCCTGCT TCTCCGGGTT TCTCAATGCC
CGGGAAGTCG CCAAACGGAT GGTGACCCGT AGCCGCGGCA CGATCCTGTT CACCGGCGCG
ACTGCCGGAT TGCGCGGTGC CTCCGGCTTC GCCGCGTTTG CCGGAGCCAA GCACGGTATC
CGGGCTCTGG CACAGAGCAT GGCCAGAGAG CTTGGCCCGA TGAACATTCA CGTCGCCCAC
GTCGTGGTCG ACGGCGCCAT CGATACCGAT TTCATCCGCG ACAATTTCCC TGACAAATAC
GCCACCAAGG ACCAGGAGGG CATTCTCAAT CCAGAGCATA TCGCCGAGAA CTACTGGTAT
CTGCATAGCC AGCCACGGGA CGCCTGGACG TTCGAGCTGG ATCTGCGTCC GTGGAACGAA
CGCTGGTAA
 
Protein sequence
MNNKKVVLVV GAGDATGGAI AKRFAREGFI ACVTRRSADK LQPLVEAIQA AGGEAHGFAC 
DARKEEDVIA LIEDIETRLG PIEAFVFNIG ANVPCSILEE TARKYFKIWE MACFSGFLNA
REVAKRMVTR SRGTILFTGA TAGLRGASGF AAFAGAKHGI RALAQSMARE LGPMNIHVAH
VVVDGAIDTD FIRDNFPDKY ATKDQEGILN PEHIAENYWY LHSQPRDAWT FELDLRPWNE
RW