| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_3783 |
|---|
| Symbol | |
|---|
| ID | 3714715 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 4279638 |
|---|
| End bp | 4281191 |
|---|
| Gene Length | 1554 bp |
|---|
| Protein Length | 517 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | |
|---|
| Product | trypsin domain-containing protein |
|---|
| Protein accession | YP_349512 |
|---|
| Protein GI | 77460005 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.358948 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGGAA CCCTTGCTGG TGTTGAAACC ATGAAACCTC CTATCGCGCA TCAGTTCATT
GCCTTGATGT TCCTCATCGC CCTGAGCGGT TGCACCACGC TCGACGGTGC GGCCACTCAG
GATTGGGGAG AAGGCGCAGT CAACCTCTCC CCTGCCGAAA TTCTGAACAA CGCAGCCGGG
CGCTACGATC ACTGGCAAGC CATTGCTCGC GTCAAGGTTG AAGGCAGTTC TGTCTGCTCG
GGCAGCCTGA TCGATACCCG AGGCGCAAAC GATGACCGCA GCGGCCCGGC CTACATCCTG
ACGTCAGGAC ATTGCGCAAA AGGTGACGCT AACCGGTACG TCGAAAACGC CCCGGCGTCC
GGTCTCGTTA CCTTCAACTT TTTCCAGGAC ACCCAGTCCC AACAAAAGCG CTACCCGATC
GTTGGAATCG AGTGGAGCAC CCTGCGAGGT CTCGACATTG CAATTCTCAG GCTCGATCGC
ACACTCAACC AATTGATGAC CGATGGCATC ACGCCGCTCA AAGTGGCGTC GCAACCGCTG
GCTGTCGACA GTGATGTGCT GGTGGTTGGC GCACCGATGG ATGGCCATGT GCAACGCGCC
GCCTGCCCTC AGGAGCACCG CGCGGATGTT TTCGAAGCGG GTTGGACATG GCCCGGACAA
TTCAGCAACC GTTGCCGGGA GGTACGGCCC GGCATTTCGG GTTCACCTGT CTTGAATCGG
TACAGCAATG AAATCGTGGC GATCGTCGGC ACCACAACGC AAGGCAGCGG GCTCTCACGT
TGCACTCGCA ACGCCCCGTG CGAAGTCAAC AAAGGGGAAT CGATAAAAAT ACCGGAGACC
AACTACGCCA CCGGAGCAGC GCAGCTGAAC CAGTGTTTTA CAGCCACTCA TTTCAACCCG
AAAAACCCGG AGTGCCCATT GGGCCGCGCG ACAAATTTCG ATCCCATATT TGGTGACGTC
TATATGAGGT TGGTCCGTGG CGCGAATGGG GAATTCATCC CTTTGCAATG GAAGCAATCG
TTCACCAGCG ATCAACCGTT CTATCGGGTA AGGCTTGTAA AGACATTGGC CGACTGTGCG
TCGGACGTCG GTTACGATCC GGTACAACCG AGCCATGGAG ACGATTCAGA CAGTTCGACT
CAGACGCTGC GCGATGGACC GGGTCTGTAT TTCCTGTGTG TGGTCGGGCA ACAACATAAT
GCAGGGCCCG GGGAAAGATG GGCCGGCCGC AATGCAAGAA TCTATTACCG CTGGGCTCTG
GCAGAACCCG TCAAGACGCC GCCTGCCTAC AGCGCATTTG AAAGTGCAAA GGATGAGTTC
ACCGTACAAC CGCTCGGGAT AACGCCGGAT CTGGACGTCA GTCGCTACCA ATACAAAAGT
GGTGAACCAG AAATGGTCGA CTGCCAAAGC AGTGAGGGTT ACAAGTCGGT CAGGCCGCCG
CTGCTGGACT TTAAGGTTTC GGTGGGGGAC GGCCCGAAAA AAGTCTGCCT CAAGACCACA
GACATGGCAG GCAATCCCTC TCCAATTAGT GATTTTGCGT TGCCCAGTCA GTGA
|
|---|
| Protein sequence | MRGTLAGVET MKPPIAHQFI ALMFLIALSG CTTLDGAATQ DWGEGAVNLS PAEILNNAAG
RYDHWQAIAR VKVEGSSVCS GSLIDTRGAN DDRSGPAYIL TSGHCAKGDA NRYVENAPAS
GLVTFNFFQD TQSQQKRYPI VGIEWSTLRG LDIAILRLDR TLNQLMTDGI TPLKVASQPL
AVDSDVLVVG APMDGHVQRA ACPQEHRADV FEAGWTWPGQ FSNRCREVRP GISGSPVLNR
YSNEIVAIVG TTTQGSGLSR CTRNAPCEVN KGESIKIPET NYATGAAQLN QCFTATHFNP
KNPECPLGRA TNFDPIFGDV YMRLVRGANG EFIPLQWKQS FTSDQPFYRV RLVKTLADCA
SDVGYDPVQP SHGDDSDSST QTLRDGPGLY FLCVVGQQHN AGPGERWAGR NARIYYRWAL
AEPVKTPPAY SAFESAKDEF TVQPLGITPD LDVSRYQYKS GEPEMVDCQS SEGYKSVRPP
LLDFKVSVGD GPKKVCLKTT DMAGNPSPIS DFALPSQ
|
|---|
| |