Gene Pfl01_3627 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3627 
Symbol 
ID3715054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4100719 
End bp4101942 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content61% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_349356 
Protein GI77459849 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACAAGA CAACGTTGGC CGAGCGTGAG CTCACAGCCG ATCAGGCAGA ACGGCGTATT 
CATGTCGAAC TTTCATGCCT GGGCCTCACG CCACACACCC GCACCTTCGG CAGCAAAGTC
GTTGCCGTCC AGGCGAGTCT TCAGGGCAGC GATAACCGCC ATGCCTGCGG CTCCGGCAAG
GGCTATGCAG ATCAGGCGCA CCTGGGCGCG CTTTATGAAG CGCTCGAGCA CTATTGGACG
GATAAGCTCT GCACCTGCGA TGTTCACGAA GAGACTGAAC GCTATTTCAA AGACACGCCG
ATGTTTGCCG ATGACTCGCT TCTGCACAGG CTCACCAGCC AACAAAACGT GCGCATCACC
TGCCGAACCT ATGTCTGTCC GCCGTGGCAT GACCGGTTTT TCTATCCGAT TGCGCTGACC
TCGCCGAACG GCTCACGTTT GCCCTCGTCA CCGGGCATGG CGGACTGCCG CGCCGTACAG
CGCTACGCCA GCAACAGCGG CACCGCGATT GGCGCCACTT ACAACGAAGC GCTGCTGCAC
GCCGCCAACG AGTGCATCGA GCGCGACGCC GTGTCGTTGT TTCTGCTCGA TCATTTCTAT
TACCAGAACC ATCCGCCACT GCGCCGGGTG GTACGTCTCA CTGAAAGCGA CGAACTCGGT
CGTCTATGGG CCGATGCCGA ACAGGAAATC GACGGCGAAA TCGTGCTGGT GGATATCAGC
ACCGAGTTCA AGACGCGGAC CTTTCTGGCC TTCACTACGA AGCCAAGCCC TCATCCACAG
GTATTCGGCA GCGGCAGCTC TCTCGACCCG CGCCATGCTG CGTGGCGGGC GCTTACTGAA
CTGGTGCAGT TGCAACTGAG TGCCGCCGAA CCTGAATACC GCCAGACACT GGCCAATGCG
CTGCGCAACC TGCAACCCTT CCCGCGCCTG CTGCGCTGTG CGCAGTTCGA GCCGCAGACG
CTGCTGCATC GCTGCGTTCA ACACGAGGTG AAACTGCCGG ATTCCGCTAA AGACCTGTCG
GTGGACAGTC AACTGCACTT GCTGACTCAA GACCTGCGGA TTCATGGCCG TACGCTCGGT
GCCGCCGTCC TGCAGCGAAC CGAGCTCGGC ACCACCCTGC TCAACGTGGT GATCCCCGGA
CTGGAACGCT TCTTCGTGGT CTCCAGCGGT AACGTCGTCG TCCCGCAAGC CCGGGGCCTT
ACGCTGGAGA GGCCCGCCTC ATGA
 
Protein sequence
MHKTTLAERE LTADQAERRI HVELSCLGLT PHTRTFGSKV VAVQASLQGS DNRHACGSGK 
GYADQAHLGA LYEALEHYWT DKLCTCDVHE ETERYFKDTP MFADDSLLHR LTSQQNVRIT
CRTYVCPPWH DRFFYPIALT SPNGSRLPSS PGMADCRAVQ RYASNSGTAI GATYNEALLH
AANECIERDA VSLFLLDHFY YQNHPPLRRV VRLTESDELG RLWADAEQEI DGEIVLVDIS
TEFKTRTFLA FTTKPSPHPQ VFGSGSSLDP RHAAWRALTE LVQLQLSAAE PEYRQTLANA
LRNLQPFPRL LRCAQFEPQT LLHRCVQHEV KLPDSAKDLS VDSQLHLLTQ DLRIHGRTLG
AAVLQRTELG TTLLNVVIPG LERFFVVSSG NVVVPQARGL TLERPAS