| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_3498 |
|---|
| Symbol | |
|---|
| ID | 3713721 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 3978739 |
|---|
| End bp | 3979488 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_349227 |
|---|
| Protein GI | 77459720 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.131398 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0583742 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCTTGC TCTGGTGGCC TAACATGTGG ATGGAAGAAC TTCAAAGACA GATTCATAAC
AACAACGAAG CTATGAGTAA CGCTTTTCCC GCCGTCATTG TTGGTATCTC TAAGCAATAC
CCCCCAATCG TCTCCGTCAA GCCTCTGTGC CAACGCTACA CAGATGGCGG TGAGAACATG
GACGACACCC CAATCATCAA CATTCCTGTA GCTATGCAAA GAAGTGGAAC AACTATCTTC
TACTTCCCAA TCAAGGTTGG TGATACAGGC ATGTGCATTG TGTCCGATAA CGATGCTGAG
CATTTCAAGA TCGGGAATGG AAGCCCGACA AGGGTTAACT CCAACCGTAT GAAAGACCAG
ATGGATTCTT TCTTTTATCC GGGGATTGGC CCTGCACCTG TAATGGCTTC GCAAGCTCAA
AGCATGGTGT TGCCTAAAGA TTTCTCTGAT GTATTCATTG TGCACAACGT TGGAACTGGA
CAAGAGGCCA ACGTCACAGT CAAAGCCGAT GGCAACATCG AGCTTAATAG TCAGTTCACT
GTGAAGGTGA ATGCCAGGGA TATCAGTATA ACTGCTACCA ACAGCATTAG CCTCAATGCT
CAATCCATGA GCATCAATGT AGCTAACACA CAATGGACAG GCCAGTCTTA CGTCACTGGT
GAAGTGACAG TTAACGGTAT TCCTGTTTCT ACACATCACC ACATCGGCGT TACACCGGGT
AATGGTGTGT CTGGACTTCC AGCAGCATAG
|
|---|
| Protein sequence | MLLLWWPNMW MEELQRQIHN NNEAMSNAFP AVIVGISKQY PPIVSVKPLC QRYTDGGENM
DDTPIINIPV AMQRSGTTIF YFPIKVGDTG MCIVSDNDAE HFKIGNGSPT RVNSNRMKDQ
MDSFFYPGIG PAPVMASQAQ SMVLPKDFSD VFIVHNVGTG QEANVTVKAD GNIELNSQFT
VKVNARDISI TATNSISLNA QSMSINVANT QWTGQSYVTG EVTVNGIPVS THHHIGVTPG
NGVSGLPAA
|
|---|
| |