Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3450 |
Symbol | |
ID | 3713575 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 3934983 |
End bp | 3935933 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | polysaccharide deacetylase |
Protein accession | YP_349179 |
Protein GI | 77459672 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.231432 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACTC CCCGCTGGCA ACGCTCCCCG CGTCTGCTGA AAAACCTGCT GGCCGCCGCG CTGATGCTGC CCGCCCTCGC CTTCGCTCAG GAACGCCCGT GGCCGGATGG CTCGCAACTG GTGATTTCGG TGTCGATGCA GTTCGAAACC GGCGGCCAGC CCGAGGGCGC CGAAAGTCCG TTCTCCGGCA CACCGCTGCC AAAAGGTTAT CCGGACCTGC CGGCGCAGAC CTGGTTCGAT TACGGCTACA AGGAAGGCCT GTGGCGCATG CTCGATCTGT GGGATCGCAC CGGCATCAAA GTCACCTCCC ATGTGGTCGG CGAGGCGGCG CTCAAGCACC CGGAACTCGC CAAAGCCATC GCCGAACGCG GCCATGAACT GGCGGCCCAC GGCATGCGCT GGGCCGATTC GTACAACATG AACTACGCCC AGGAAAAACA GTTCATCGGT GATGGCGTCG CCGCGGTGGA AAAAATCACA GGCCAGCGCT CGGTCGGCTA CAACGCCAAC TGGCTGCGCC GCAGCCCCAA TACGCTGAAG GTGCTGCAGG ATCTGAATTT CATCTACCAC ATTGACGACG TCAGCCGTGA CGAGCCGTTC GTGACCATGG TTCGCGGGCG AAAATTTGCC GTGGTGCCAT ACACCCTGCG CAACAACGAC ATCGTGCTGG TTGAGGGTCG GCACTTCTCC GCCGAGCAGT TCTACCAGCA ACTGGTGCTG GAATTCGATC GCCTCTACGC CGAAGGCGCG AGCAAGCGGC GGATGATGTC GGTGAGTCTG CACGATCGCA TCGGCGGTAC TCCGGCGATG GTCGAAGCCA TGGAGCGCTT CATCCGGTAC GCCCAGTCGC ATCCGAAGGT GAGTTTCATG CGCAAGGATC AGATCGCCCA GATCGTGCTG ACCGAAAAAA ATCCCCTGAT CGATAACACT GAAGCGCTCT ACAACCAGTA A
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Protein sequence | MTTPRWQRSP RLLKNLLAAA LMLPALAFAQ ERPWPDGSQL VISVSMQFET GGQPEGAESP FSGTPLPKGY PDLPAQTWFD YGYKEGLWRM LDLWDRTGIK VTSHVVGEAA LKHPELAKAI AERGHELAAH GMRWADSYNM NYAQEKQFIG DGVAAVEKIT GQRSVGYNAN WLRRSPNTLK VLQDLNFIYH IDDVSRDEPF VTMVRGRKFA VVPYTLRNND IVLVEGRHFS AEQFYQQLVL EFDRLYAEGA SKRRMMSVSL HDRIGGTPAM VEAMERFIRY AQSHPKVSFM RKDQIAQIVL TEKNPLIDNT EALYNQ
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