Gene Pfl01_3345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3345 
Symbol 
ID3713276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3820107 
End bp3820850 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content60% 
IMG OID 
ProductCrp/FNR family transcriptional regulator 
Protein accessionYP_349074 
Protein GI77459567 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.797997 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAGAAA CTCGCTCGTA TCGCGATCAA TACCTCAAAA CGGCGTGCTC CCGGTGCAGC 
GTGCTGGAGC TGTGTCTACC GCTCGGCTTG AACGGTGGAG AAATCGAGCG TCTGGACACG
CTGATCGCCC AGCGACTGAA GGTCAAAAAA GGCGCGGCAC TCTACCGTGC CGGTGATCCT
TTGCGTTCCC TCTATGCCGT GCGGCTGGGG TCATTCAAGA CCAGCGTGCT GTCGATCGAT
GGTCGCGAGC AAGTCACCGG GTTCCAGATT GCCGGTGAAA TGCTCGGTCT GGATGCCATC
AGTTCGGATC TGCACACCTG CGACGCGTTC GCGCTGGAGG ACAGCGAAGT CTGCCCCATC
CCTTTTGGCC AGCTGGAAAA ACTGGCCCGC GAGCTGCCGT CACTGCAGCA CAACCTGAAC
AGGATCCTCA GCCGGGAGAT CGTTCGCGAT CACGACATGC TGATGATCCT GGGCAACATG
AGCTCGGATG AACGCCTGGC AGCGTTTCTG TTGAACCTGT CGCAACGCTT GAGCGCTCGT
GGCTATTCGT CGCGCAGCTT TGTGTTGAAG ATGCGTCGTG AGGAAATCGG CTCCTACCTG
GGCCTGCGCC TCGAAACCAT CTGTCGCGGC ATCGCCCACC TGCGCGACCA AAAACTGGTG
GAGATTACCG GCCGCGACGT CACCATTCAG AACATGGACG GCCTCAAGCA GTTGATCGTC
GGCTGCCATC GTCACCCGCA GTGA
 
Protein sequence
MAETRSYRDQ YLKTACSRCS VLELCLPLGL NGGEIERLDT LIAQRLKVKK GAALYRAGDP 
LRSLYAVRLG SFKTSVLSID GREQVTGFQI AGEMLGLDAI SSDLHTCDAF ALEDSEVCPI
PFGQLEKLAR ELPSLQHNLN RILSREIVRD HDMLMILGNM SSDERLAAFL LNLSQRLSAR
GYSSRSFVLK MRREEIGSYL GLRLETICRG IAHLRDQKLV EITGRDVTIQ NMDGLKQLIV
GCHRHPQ