Gene Pfl01_3118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3118 
Symbol 
ID3712805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3576902 
End bp3577924 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content64% 
IMG OID 
Productbinding-protein dependent transport system inner membrane protein 
Protein accessionYP_348847 
Protein GI77459340 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGACGC TTTCTCCCAT CGGACAGCGC CGCTGGGCGC GGTTCAAGGC CCATCGGCGC 
GGCTGGTGGT CGTTATGGCT GTTTCTCGCG CTGTTCGGCC TGAGCCTGGG CGGCGAACTG
GTCGCCAATG ACAAGCCGTT GCTGGTGACG TATCAGGGCG AATGGTTTTT CCCGGCGTTC
AAGCGCTACA CCGAGCAGGA CTTCGGCGGC GAGCTGCCGT TCCAGCCCGA CTACCGCAGC
GCCCAGGTGC GTGAATTGAT CGAGGGGCAG GGCGGACGGA TGTGGTTTGC GCCGATCCCG
TTCGGCTACG ACACGGCTAA CTACGACCTC ACTGAACCGG CCCCGAGCCC GCCCACCGCC
GAAAACTGGC TGGGCACCGA CGATCAGGCG CGGGACGTGC TGGCGCGGGT GATATTCGGC
ACGCGGGTCT CGCTGTTGTT CGCCCTGGCG TTGACGGCGG TGAGCGCGTT GATCGGTATC
GCCGCCGGTG CCTTGCAGGG GTATTACGGC GGTTGGGTCG ACTTGCTCGG GCAGCGTCTG
CTGGAGGTCT GGTCGGGGCT GCCGGTGCTC TATCTGCTGA TCATTCTGTC GGGCTTCGTC
GAGCCGAATT TCTGGTGGTT GCTGGGGATC ATGGCGCTTT TTTCCTGGCT GAGTCTGGTG
GACGTGGTGC GCGCCGAGTT CCTGCGCAGC CGGGGGCTCG AGTACGTGAA AGCGGCGCGG
GCGCTGGGTG TCGGCGATGC ACAGGTGATC GTGCGGCACA TTCTGCCCAA TGCCATGAGT
GCGACCTTGA CGTACCTGCC GTTCATCCTG ACCGGGGCAA TTGCCACGTT GTCGGCGCTG
GATTTTCTCG GCTTCGGCAT GCCTGCCGGC AGCGCTTCGC TGGGCGAGTT GATCGGCCAG
GGCAAGAACA ATCTGCAAGC ACCGTGGTTG GGCCTGACGG CATTTTTTGC CCTGGCGCTG
ATTCTTTCTC TACTCGTATT CATCGGCGAA GCCTGCCGAG ATGCCTTCGA CCCCAGGACT
TGA
 
Protein sequence
MPTLSPIGQR RWARFKAHRR GWWSLWLFLA LFGLSLGGEL VANDKPLLVT YQGEWFFPAF 
KRYTEQDFGG ELPFQPDYRS AQVRELIEGQ GGRMWFAPIP FGYDTANYDL TEPAPSPPTA
ENWLGTDDQA RDVLARVIFG TRVSLLFALA LTAVSALIGI AAGALQGYYG GWVDLLGQRL
LEVWSGLPVL YLLIILSGFV EPNFWWLLGI MALFSWLSLV DVVRAEFLRS RGLEYVKAAR
ALGVGDAQVI VRHILPNAMS ATLTYLPFIL TGAIATLSAL DFLGFGMPAG SASLGELIGQ
GKNNLQAPWL GLTAFFALAL ILSLLVFIGE ACRDAFDPRT