| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_3110 |
|---|
| Symbol | |
|---|
| ID | 3712797 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 3569162 |
|---|
| End bp | 3570235 |
|---|
| Gene Length | 1074 bp |
|---|
| Protein Length | 357 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | |
|---|
| Product | periplasmic binding protein/LacI transcriptional regulator |
|---|
| Protein accession | YP_348839 |
|---|
| Protein GI | 77459332 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAAGT TTCTCCACCT CAGCCTGCTG CTGTTCGGCG CGGTTTTCGG TACGTGCGCG
CGTGCAGAGT CGGTGCTGTT CCTGAATCCG GGCTCGACCC AGGAAGCGTT TTGGGTCAGC
TACTCGCAAT TCATGCAGGC CGCCGCCCGG GACCTGGGCA TCGACTTGCG CATCCTCTAT
GCCCAGCGCC AGCCGGAACT GACCCTGGCT CAGGCGCGAC TGGCCCTGCA GGGGCCTGAG
CGCCCGGACT ATCTGGTGTT CGTCAATGAA CAGTACGTGG CGCCGCAGAT CCTGCGTATG
GCCAATGGCA GCGGCGTGAA GCTCTTTATC GTCAACTCGG CACTGACGCC CAACCAGAAG
GCGATGATGG CCGATCGTGC TGATCGCATC GGCAGTCTGG TGCCCAACGA TGAAGAGGGC
GGCTACTTGA TGATGAAGGA GCTGATTCGT CTGCATCCGG CTGTCGCGCC CGGTGAAAGC
ATCGACCTGC TGGCCTTTTC CGGTCTGAAG ATCACGCCCT CGGCCCAACT GCGAGAAAAA
GGCATGCAAC GGGCACTCGC CGAGCATCCT CAGGTGCACC TGCGGCAACT GGTCTACGGC
GGCTGGACGC AACAGCGTGC CTACGAGCAG GCCAGGCAAT TGCTGGTCCG CTATCCCAAG
GTGTCATTGG TGTGGGCGGC CAATGATGAA ATGGCCTTCG GCGCGATGCG TGCCGTTTCG
GAAGCCGGCA AGGTGCCGGG CAAAGACGTG CTGTTCAGCG CGGTCAATAC CTCGCCAGAA
GCGTTGCAGG CGTTGGTTGA CGGGCGGCTG AGCGCGTTGC TGGGCGGCCA TTTCACCCTC
GGTGGCTGGG CACTGGTCGA GCTGCATGAT CACGCGCAGG GTGTCGATCT GAATCAGTAC
GGCGGTCGTG ACCGACAGAT TCCGTTGCTG CAACTGATCG ATCGGGATCA TGCCCGCCGA
ATCCTTGCCA TGGGCGCCTC ACCGGACTAT GGCGTGCACT TTCGCAAGCT CTCGGCGAAA
GGCCGTCCGG TTTCCTACCG CTATCCGTTC AATCTGCAGA CACTGATGCA CTGA
|
|---|
| Protein sequence | MFKFLHLSLL LFGAVFGTCA RAESVLFLNP GSTQEAFWVS YSQFMQAAAR DLGIDLRILY
AQRQPELTLA QARLALQGPE RPDYLVFVNE QYVAPQILRM ANGSGVKLFI VNSALTPNQK
AMMADRADRI GSLVPNDEEG GYLMMKELIR LHPAVAPGES IDLLAFSGLK ITPSAQLREK
GMQRALAEHP QVHLRQLVYG GWTQQRAYEQ ARQLLVRYPK VSLVWAANDE MAFGAMRAVS
EAGKVPGKDV LFSAVNTSPE ALQALVDGRL SALLGGHFTL GGWALVELHD HAQGVDLNQY
GGRDRQIPLL QLIDRDHARR ILAMGASPDY GVHFRKLSAK GRPVSYRYPF NLQTLMH
|
|---|
| |