Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3088 |
Symbol | |
ID | 3712775 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 3538007 |
End bp | 3538396 |
Gene Length | 390 bp |
Protein Length | 129 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | endoribonuclease L-PSP |
Protein accession | YP_348817 |
Protein GI | 77459310 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.123749 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATTA CTCGTTACGG CACCGGCAGC ACCGCCGCTG GCGGCCAGCC TCGTCCATTC GCCCGCGCCG TTGAAGCCGA TGGCTGGCTG CACGTTTCCG GGCAGGTGCC GGCGGTGGAT GGCGAGATCA TCGTGGGCGG CATCGTCGAG CAGACGCACC AGACCATGAA GAACCTGATC GCGATTCTCG AAGAGGCCGG TTATGGCCTG GAAGATGTAG TGCGCGCCGG CGTGTGGCTG GACGATCCGC GGGATTTCAG CAGTTTCAAC AAGGTCTTCG GCGAATACTT CAAGCCTGAA CACGCACCGG CCCGAGCCTG CGTACAGGCG AGCATGATGG TCGACTGCAA GGTCGAGATC GACTGCATTG CGTACAAGAA GAAGGCTTGA
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Protein sequence | MSITRYGTGS TAAGGQPRPF ARAVEADGWL HVSGQVPAVD GEIIVGGIVE QTHQTMKNLI AILEEAGYGL EDVVRAGVWL DDPRDFSSFN KVFGEYFKPE HAPARACVQA SMMVDCKVEI DCIAYKKKA
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