Gene Pfl01_3088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3088 
Symbol 
ID3712775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3538007 
End bp3538396 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content61% 
IMG OID 
Productendoribonuclease L-PSP 
Protein accessionYP_348817 
Protein GI77459310 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.123749 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATTA CTCGTTACGG CACCGGCAGC ACCGCCGCTG GCGGCCAGCC TCGTCCATTC 
GCCCGCGCCG TTGAAGCCGA TGGCTGGCTG CACGTTTCCG GGCAGGTGCC GGCGGTGGAT
GGCGAGATCA TCGTGGGCGG CATCGTCGAG CAGACGCACC AGACCATGAA GAACCTGATC
GCGATTCTCG AAGAGGCCGG TTATGGCCTG GAAGATGTAG TGCGCGCCGG CGTGTGGCTG
GACGATCCGC GGGATTTCAG CAGTTTCAAC AAGGTCTTCG GCGAATACTT CAAGCCTGAA
CACGCACCGG CCCGAGCCTG CGTACAGGCG AGCATGATGG TCGACTGCAA GGTCGAGATC
GACTGCATTG CGTACAAGAA GAAGGCTTGA
 
Protein sequence
MSITRYGTGS TAAGGQPRPF ARAVEADGWL HVSGQVPAVD GEIIVGGIVE QTHQTMKNLI 
AILEEAGYGL EDVVRAGVWL DDPRDFSSFN KVFGEYFKPE HAPARACVQA SMMVDCKVEI
DCIAYKKKA