Gene Pfl01_3087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3087 
Symbol 
ID3712774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3537000 
End bp3537764 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content61% 
IMG OID 
ProductIclR family transcriptional regulator 
Protein accessionYP_348816 
Protein GI77459309 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0787215 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAG ACACCATCAA GCGCCGGGCA CGCGGTCTGG ACCGGGCGTT CGATATCCTC 
GATTTCCTCA AGGAAATCGG CCAGCCACTG CGCCCGAACG ATATCGCCAA CGGTATCGGC
AGCCCGAAAT CCACGGTCTA CGAACTGGTG GCGTCATTGC TCGAACGTCG GATTCTGGAG
CCGGTGGGCA AGGACGGTCA CGTCTATCTC GGTCGTCAGC TGTACTTCCT CGGCCAGGCG
CACTTGCGGC ATTTCGACCT CAGTCGCGAG GCCGATCACG CCTTGCAGGA GATCGTCAGC
CAGACCCGGG AAACCGCGCA GATGTGCCTG CTCAACGGGC GCAAATACAC GGTGGCGCTG
ATGAAGGAGG GCGAGCGGCA TTTCCGCATT TCTTCCGATA TCGGCGAAAA CGCGCCGATC
CCGTGGACCG CCTCGGGACG CCTGCTGCTG GCGCACTTGA GTGACCAGCA GATAAGCGAC
TTGATCGACC CCGACGACTT CATCCTGCCG GATGGCGAAC GTCTGCCGAT GGAGACGTTT
CTGGCGGAAA TCCGTCAGGC CGGCATCGAC GGTTTCTTCT CCTTCGACAG TGTCGCCGAC
ACCTTTACCC ACTGCTTCGC CGCCCCGGTG AAAGACCCTC AAGGCGTTGC CATCTGCACC
CTGTGCATCG TCGCCCCGCG TGCCGATGCC AAGAACAATT ACAACGACTA TCGCCGGGTC
TTGATCGAGA GCGCCAACAG CCTCGCCCGG CGAATCAACG AATAA
 
Protein sequence
MTEDTIKRRA RGLDRAFDIL DFLKEIGQPL RPNDIANGIG SPKSTVYELV ASLLERRILE 
PVGKDGHVYL GRQLYFLGQA HLRHFDLSRE ADHALQEIVS QTRETAQMCL LNGRKYTVAL
MKEGERHFRI SSDIGENAPI PWTASGRLLL AHLSDQQISD LIDPDDFILP DGERLPMETF
LAEIRQAGID GFFSFDSVAD TFTHCFAAPV KDPQGVAICT LCIVAPRADA KNNYNDYRRV
LIESANSLAR RINE