Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3075 |
Symbol | |
ID | 3712762 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 3518143 |
End bp | 3519165 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | binding-protein dependent transport system inner membrane protein |
Protein accession | YP_348804 |
Protein GI | 77459297 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTCAAGC TCTCGCCTCT GGGCCGTCGC CGCTTCGAAC GCTTCAAGAA AAACCGCCGG GGCTGGTGGT CGCTGTGGCT GTTTATCGGT CTGTTCCTGC TCAGCCTTGG CGGCGAACTG ATTGCCAACG ACAAGCCATT GGTCGTCAGT TATCAGGGCC AATGGTATTT CCCGGTATTC AAGCGCCACA CCGAACAGGA GTTTGGCGGG CAACTGCCGT TCCAGGCCGA CTACCGCAGC GATTACGTAC AGAAGCTGAT CCGCAAGGAC GGTGGCTGGC TGCTGTTCCC GCCGATTCCG TTCAGTGACG ACACCCCGAA TTACGACCTC AACAAACCGG CGCCGAGCCC GCCGACTTCG GTCAACTGGC TGGGCACCGA CGATCAGGCG CGCGACGTAC TGGCCCGGGT GATCTTCGGC GCGCGGGTGT CGATCCTGTT CGCCCTGATG CTGACCTTCG TCAGCGCCCT GATCGGCATA GCAGCCGGCG CCCTGCAGGG CTATTACGGG GGCTGGGTCG ATCTGCTCGG CCAGCGTCTG CTTGAAGTCT GGTCAGGGTT GCCTGTGCTT TACCTGCTGA TCATCCTTTC GGGATTCGTC GAGCCGAACT TCTGGTGGCT GCTGGGGATC ATGGCGCTGT TTTCCTGGCT GGCGTTGGTG GACGTGGTAC GCGCCGAGTT CCTGCGCGGG CGCAATCTCG AGTACGTCAA GGCTGCCCGA GCCTTGGGCT TGAGCGATCG CAAAGTGATT GTCCGGCACA TCCTGCCCAA CGCAATGAAC GCGACCCTGA GCTACCTGCC CTTCATTCTG ACCGGGGCGA TTTCGACCCT GACCGCGCTG GATTTCCTGG GTTTCGGCAT GCCCGCCGGC AGCGCGTCAC TGGGTGAGTT GATCGGTCAG GGCAAACAGA ACCTGCAAGC GCCGTGGCTC GGCTTGACCG CGTTTTTCAC CCTGGCGTTG ATTCTTTCCC TGTTGGTATT CATCGGCGAA GCGTTGCGCG ATGCCTTTGA CCCGCGCTCA TGA
|
Protein sequence | MFKLSPLGRR RFERFKKNRR GWWSLWLFIG LFLLSLGGEL IANDKPLVVS YQGQWYFPVF KRHTEQEFGG QLPFQADYRS DYVQKLIRKD GGWLLFPPIP FSDDTPNYDL NKPAPSPPTS VNWLGTDDQA RDVLARVIFG ARVSILFALM LTFVSALIGI AAGALQGYYG GWVDLLGQRL LEVWSGLPVL YLLIILSGFV EPNFWWLLGI MALFSWLALV DVVRAEFLRG RNLEYVKAAR ALGLSDRKVI VRHILPNAMN ATLSYLPFIL TGAISTLTAL DFLGFGMPAG SASLGELIGQ GKQNLQAPWL GLTAFFTLAL ILSLLVFIGE ALRDAFDPRS
|
| |