Gene Pfl01_3075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3075 
Symbol 
ID3712762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3518143 
End bp3519165 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content61% 
IMG OID 
Productbinding-protein dependent transport system inner membrane protein 
Protein accessionYP_348804 
Protein GI77459297 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAAGC TCTCGCCTCT GGGCCGTCGC CGCTTCGAAC GCTTCAAGAA AAACCGCCGG 
GGCTGGTGGT CGCTGTGGCT GTTTATCGGT CTGTTCCTGC TCAGCCTTGG CGGCGAACTG
ATTGCCAACG ACAAGCCATT GGTCGTCAGT TATCAGGGCC AATGGTATTT CCCGGTATTC
AAGCGCCACA CCGAACAGGA GTTTGGCGGG CAACTGCCGT TCCAGGCCGA CTACCGCAGC
GATTACGTAC AGAAGCTGAT CCGCAAGGAC GGTGGCTGGC TGCTGTTCCC GCCGATTCCG
TTCAGTGACG ACACCCCGAA TTACGACCTC AACAAACCGG CGCCGAGCCC GCCGACTTCG
GTCAACTGGC TGGGCACCGA CGATCAGGCG CGCGACGTAC TGGCCCGGGT GATCTTCGGC
GCGCGGGTGT CGATCCTGTT CGCCCTGATG CTGACCTTCG TCAGCGCCCT GATCGGCATA
GCAGCCGGCG CCCTGCAGGG CTATTACGGG GGCTGGGTCG ATCTGCTCGG CCAGCGTCTG
CTTGAAGTCT GGTCAGGGTT GCCTGTGCTT TACCTGCTGA TCATCCTTTC GGGATTCGTC
GAGCCGAACT TCTGGTGGCT GCTGGGGATC ATGGCGCTGT TTTCCTGGCT GGCGTTGGTG
GACGTGGTAC GCGCCGAGTT CCTGCGCGGG CGCAATCTCG AGTACGTCAA GGCTGCCCGA
GCCTTGGGCT TGAGCGATCG CAAAGTGATT GTCCGGCACA TCCTGCCCAA CGCAATGAAC
GCGACCCTGA GCTACCTGCC CTTCATTCTG ACCGGGGCGA TTTCGACCCT GACCGCGCTG
GATTTCCTGG GTTTCGGCAT GCCCGCCGGC AGCGCGTCAC TGGGTGAGTT GATCGGTCAG
GGCAAACAGA ACCTGCAAGC GCCGTGGCTC GGCTTGACCG CGTTTTTCAC CCTGGCGTTG
ATTCTTTCCC TGTTGGTATT CATCGGCGAA GCGTTGCGCG ATGCCTTTGA CCCGCGCTCA
TGA
 
Protein sequence
MFKLSPLGRR RFERFKKNRR GWWSLWLFIG LFLLSLGGEL IANDKPLVVS YQGQWYFPVF 
KRHTEQEFGG QLPFQADYRS DYVQKLIRKD GGWLLFPPIP FSDDTPNYDL NKPAPSPPTS
VNWLGTDDQA RDVLARVIFG ARVSILFALM LTFVSALIGI AAGALQGYYG GWVDLLGQRL
LEVWSGLPVL YLLIILSGFV EPNFWWLLGI MALFSWLALV DVVRAEFLRG RNLEYVKAAR
ALGLSDRKVI VRHILPNAMN ATLSYLPFIL TGAISTLTAL DFLGFGMPAG SASLGELIGQ
GKQNLQAPWL GLTAFFTLAL ILSLLVFIGE ALRDAFDPRS