Gene Pfl01_3023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3023 
Symbol 
ID3712707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3459347 
End bp3462100 
Gene Length2754 bp 
Protein Length917 aa 
Translation table11 
GC content61% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_348752 
Protein GI77459245 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTACCG GCGATTCGAG CAACCGCACT CCTGCGTGGA AAGCCTGGCG CAACCCATTG 
CGCCCTCGCG CCACCTTGGC CGATGACGCC GCACTCTATA CGCACAACCC CAGCTTCACC
GATCACCTGC CTTGGGTCGA GTACCTCGAC ACCGAGCAAT GTTTTCTGCT CGATGACAAT
CGTTCGGTGG GCGCGGTGTT CGAGTTACTG CCCATCGGCA CCGAAGGGCG CGAACCCGAT
TGGCTGATGG CGGCCCGCGA TGCCCTTGAG GATGCCCTGC AGGATAGCTT TGACGAGCTG
GATCAAGCGC CTTGGGTAGC GCAGTTTTTC TGCCAGGACG ACAACGATTT AACCCCCTAT
CTGACCCGAC TCAACGATTA TATTCAGGAC AGAGCGCGAG GTACGGTGTT CACCGAAGCG
TACCTGGAAC TTACTCGCCG ACATCTGAAG GCCATCGCCA AGCCGGGCGG TCTGTTCGAA
GACAACGCAG TCACGCGCCT ACCCTGGCGC GGAAACAACC GCCGGGTGCG CTTGGTGGTT
TATCGCTGGC TTGAGTCTGA CGACGAGGAG ACAGGACTCA CCCCGGTGCA ATCCCTGCAT
GAGGCTTGCG AACGTATCGC GGCTTCGTTG CAGGCCTGCG GCGTACAATC GGTACGAGTC
GATGGCCGCG GTCTTTATGC CTGGTTAGTG CCCTGGTTCA ATCCGGCCCC CCAGCTCACC
GATGAAGCGC CCGAGGAGTT CTACCGCCGC GTGGCCTATC CGGAGTCAGG CGACGGTGAA
TCGCTGGAAC TGCCCTTTGA TCATGACTTT GCCGAGCGGC TGTTCTTCAA TGAACCGCGT
TCGGATGTGC AGCACGGACT CTGGTTTTTT GACGATCAGC CCCACCGGGT CATGGTAGTG
GACAAGCTGC GCCGAGCGCC CCTGATTGGT CAACTCACCG GAGAAACCCG CAAGGGCGAC
GCGGTGAATG CCCTGTTCGA CCAGTTACCC GAGGGCACGG TGGTGAGCCT GACCCTGGTG
GCCAAACCAC AGGATGTACT CGAAGACCAG TTGAACCGCT TGGCGCGAAA AGCCATCGGT
GAAAATCTGG CCTCGACCCA GACCCGCCAA GATGTCGAAG AGGCTCGTGC GATCATCGGT
CGCCAGCACA AGCTGTACCG CGGCACGCTG GCGTTCTACG TGCGCGGTCA CGATGAACTG
CAATTGCACC AGCGCTCGGT CAGCCTGGCT AACGCGCTGC TGGGTGCGGG GCTGCAACCG
GTACGTGAAG GCGATGAAGT CGCCGCCTGC AACAGCTACC TGCGTTGGTT ACCGATGGCT
TACAACCCGG CGCGCGACAC GCGCAACTGG TACACCCGCC TGATGTTTGC CCAGCACCTG
GCGAATCTGG TTCCGGTGTG GGGCCGCAGC ACCGGCACCG GCCACCCGGG CATCACCCTG
TTCAATCGGG GTGGTTCGCC GTTGAGTTTT GATCCGTTGT CACGTCTTGA CCGGGCCATG
AACGGCCATC TGCTGTTGTT CGGCCCGACT GGCGCCGGCA AATCGGCCAC CCTGGTCACC
CTGCTGATGC AGGTCATGGC TGTGTACCGC CCTCGTCTGT TTATCGTCGA GGCCGGCAAC
TCATTCGGCT TGCAGGGAGA CTACTTCGCG ACACAGGGCC TGTCGGTCAA CAAGGTCCAA
TTGAAACCTG GCGCCTCGGT CAGTCTCGCC CCGTTCGCCG ATGCTTGGCG CCTGGTCGAG
CAGCCGGATC AGGTGGCGAG TCTATCGATC GATGAGCTGG ACGATGAGGT GGTAACCAGT
CGCGAAGACC AGCGCGATGT TCTTGGCGAA CTGGAAATCA CCGCTCGGCT GATGATCACC
GGCGGCGAGG CCAAGGAAGA GGCCCGCCTG AGTCGAGCTG ATCGCAGCTT GATTCGCGAG
TGCATTCTCG ATGCGGCGCA GACCTGTGTC GCAGCGAACC GCCAGGTGCT GACCCGCGAC
GTGCGCAACG CTTTGCTGCG CGTCGCCGCC GACCTGCACT TACCGGAAAA ACGTCGCGAA
CGTGCCCAGG AGATGGGCGA GTCCATCGAC CTGTTTTGCC AGGGTTTCGA AGGGGAACTG
TTCGATCGCG AGGGCACGCC TTGGCCCGAG AGCGATGTGA CCATTGTCGA TCTCGCCACT
TACGTTCGCG AAGGCTACGA GGCGCAGATG TCCATCAGCT ATATCAGCCT GATGAACACC
GTGAACAACC TTGCCGAGCG CGACCAGTAT CTGGGCCGAC CGATCATCAT GGTCACCGAC
GAGGGCCATA TCATCACCAA GAACCCGCTA TTGACGCCAT TTGTGGTCAA GGGGACGAAG
ATGTGGCGCA AGCTCGGCGC TTGGTTCTGG CTCGCCACGC AAAACCTTGC CGATTTTCCC
ACGGCGGCGC AGACCATGCT CAACATGATC GAATGGTGGA TTTGTTTGAA TATGCCGCCC
GCGGAGATTG AGGAAATCGC ACGGTTCAAG AAGCTCACGC CGGCGCAGAA AGCCTTGTTG
CTCTCCGCCA GTAAGGAGCC GGGGAAGTAC ACTGAGGGGG TCGTGCTGTC GAAGAAGCTC
GAGACACTGT TTCGAGCCGT GCCACCCAGC CTTTACCTCG CCCTGGCCAT GACCGAGCCC
GAGGAAAAAG CCGAGCGTTG GACGCTGATG CAGGAGAACG GCTGCTCAGA ACTGGAAGCG
GCGTATAGGG TAGCTGAACG GATCGATAGA GCGCGAGGAA TAGAACCCGC ATAG
 
Protein sequence
MRTGDSSNRT PAWKAWRNPL RPRATLADDA ALYTHNPSFT DHLPWVEYLD TEQCFLLDDN 
RSVGAVFELL PIGTEGREPD WLMAARDALE DALQDSFDEL DQAPWVAQFF CQDDNDLTPY
LTRLNDYIQD RARGTVFTEA YLELTRRHLK AIAKPGGLFE DNAVTRLPWR GNNRRVRLVV
YRWLESDDEE TGLTPVQSLH EACERIAASL QACGVQSVRV DGRGLYAWLV PWFNPAPQLT
DEAPEEFYRR VAYPESGDGE SLELPFDHDF AERLFFNEPR SDVQHGLWFF DDQPHRVMVV
DKLRRAPLIG QLTGETRKGD AVNALFDQLP EGTVVSLTLV AKPQDVLEDQ LNRLARKAIG
ENLASTQTRQ DVEEARAIIG RQHKLYRGTL AFYVRGHDEL QLHQRSVSLA NALLGAGLQP
VREGDEVAAC NSYLRWLPMA YNPARDTRNW YTRLMFAQHL ANLVPVWGRS TGTGHPGITL
FNRGGSPLSF DPLSRLDRAM NGHLLLFGPT GAGKSATLVT LLMQVMAVYR PRLFIVEAGN
SFGLQGDYFA TQGLSVNKVQ LKPGASVSLA PFADAWRLVE QPDQVASLSI DELDDEVVTS
REDQRDVLGE LEITARLMIT GGEAKEEARL SRADRSLIRE CILDAAQTCV AANRQVLTRD
VRNALLRVAA DLHLPEKRRE RAQEMGESID LFCQGFEGEL FDREGTPWPE SDVTIVDLAT
YVREGYEAQM SISYISLMNT VNNLAERDQY LGRPIIMVTD EGHIITKNPL LTPFVVKGTK
MWRKLGAWFW LATQNLADFP TAAQTMLNMI EWWICLNMPP AEIEEIARFK KLTPAQKALL
LSASKEPGKY TEGVVLSKKL ETLFRAVPPS LYLALAMTEP EEKAERWTLM QENGCSELEA
AYRVAERIDR ARGIEPA