Gene Pfl01_3021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3021 
Symbol 
ID3712705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3457454 
End bp3458968 
Gene Length1515 bp 
Protein Length504 aa 
Translation table11 
GC content61% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_348750 
Protein GI77459243 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.333759 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.871415 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCTA ACGCCTTGCT CAAATGGCTG GTACCGGCGG CGTTGTTGGC CGTGGTTTTG 
ATCATCCTGA AAAGCTGGGT CGCGGGTAGT ACTCCCTCTC CAGAGCACCC TGTTAATGAG
GGCAACATTC AGTTATCCGC CGAGCAAGCC AAGTCGCTCG GCATTGCGGG CGACACCCCA
CGCGACACGG TCGCCACCCT GGTCGGCCAG GTGAAGGCCA TGCGCAGCGA CATGCTCGGT
TTGAAGAAAC ACAACGATTC ACTGCAGACG GAGAACAACC GCCTACGCGA GCGGGAAAAC
AGTGTCGATT CGCGTATCCA GACCGCGCTT GGCAGCGTGA CCCAGCAGGT CGACGAAGGC
CGCCGTCAAG CCAACGAGGC CCGACTCAAA GCGGAACAAG ACAGTCGTCA GGCTCGCGGT
CTGCTGACGC AATTGCAGGG ACAGCTGTCG GGGCTGACCG GCAAAGGCAA GGACATGCCA
ATCGGCTTGG GGCTTGAGCC GGCCGACGGT GCTCAGTTCG AAGGGCAGTA TTCTGCCAAT
GATGCGCTGC AGTGGATTGA ACCCTCGGAT ACTCAGCCCA CCGATGCCCG AGGAAAAACC
AATACCTCTT CCACTCTAAC TCTGCCTACC GCCTTCAGCT CGCTAGAGGT CCTGAAAGAC
AACACCATCG ACCGCAGCCA GAAACAGTTA CGCGCGGTCA CCCAGGGCGA GCGTGACCCG
ACACGATTCG CTGACCGTAC CGAAGGTGCG AAGCCGATCT ACACGATTCC CGAAAACGCC
ACGCTGATGG GCTCGATCGC CATGACTGCG CTGATCGGCC GCGTCCCGGT GGACGGCACC
GTGAATGATC CCTATCCCTT CAAGGTGCTG GTCGGTCCGG AGAATCTGAC GGCCAACGGC
ATCGACCTGC CGGACGTCGC GGGTGCTGTG ATGAGCGGCA CGGCGTCCGG TGACTGGACC
CTGTCCTGCG TGCGTGGTCA GGTCGAGTCA ATCACCTTTG TGTTTACCGA TGGCACCATC
CGCACGGTGC CTCAGCCTAA GGCCGTCGCC AGCCGCACTG CCTCCACCAC CCAGAGTTCG
AACTCCGACA AGATCCGTGG TGGACTCGGT TACCTGTCCG ATCCGTATGG CATTCCTTGC
ATTGCCGGCG AGCGCCGCTC GAACGCCCAG CAGTACCTCG GCAGCCAGAG CCTGATCACT
GCCGCCGGCG CCGGTGTTGC CGCCCTGCTC GGGGATGAGC AGAACAACAG CAGCGTGATC
AGTTCAGGCG GCAGTACCCT CGGGGTCAGC AGTAGCAGTG GCAACAGCGC ACTGAATTCA
ATTCTCAGTG GTGGGGTCAA CGACATCCGC GAGTGGGTCA ACAAACTCTA TGGCGAAGCC
TTTGCTGCCG TGTACGTGCC TCCGGCCGCA CAAGTCGCCC TGCACCTCGA CCAAGAGATC
ACCATCGACT ACGAGCCCAA GGGCCGGAGC GTTCACCATG AAAAAGACCA TGCCTCTGCG
TCTGACCTGG ATTAG
 
Protein sequence
MKANALLKWL VPAALLAVVL IILKSWVAGS TPSPEHPVNE GNIQLSAEQA KSLGIAGDTP 
RDTVATLVGQ VKAMRSDMLG LKKHNDSLQT ENNRLREREN SVDSRIQTAL GSVTQQVDEG
RRQANEARLK AEQDSRQARG LLTQLQGQLS GLTGKGKDMP IGLGLEPADG AQFEGQYSAN
DALQWIEPSD TQPTDARGKT NTSSTLTLPT AFSSLEVLKD NTIDRSQKQL RAVTQGERDP
TRFADRTEGA KPIYTIPENA TLMGSIAMTA LIGRVPVDGT VNDPYPFKVL VGPENLTANG
IDLPDVAGAV MSGTASGDWT LSCVRGQVES ITFVFTDGTI RTVPQPKAVA SRTASTTQSS
NSDKIRGGLG YLSDPYGIPC IAGERRSNAQ QYLGSQSLIT AAGAGVAALL GDEQNNSSVI
SSGGSTLGVS SSSGNSALNS ILSGGVNDIR EWVNKLYGEA FAAVYVPPAA QVALHLDQEI
TIDYEPKGRS VHHEKDHASA SDLD