Gene Pfl01_3000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3000 
Symbol 
ID3712162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3441791 
End bp3442231 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content59% 
IMG OID 
Productsingle-stranded DNA-binding protein 
Protein accessionYP_348729 
Protein GI77459222 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0539656 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACTT TTTTCGTTGG CGAAGGCAAT ATCGGCAGTG CGCCAGAGTT CCAGGAGTTT 
CCATCAGGCA ATGACGAGCC ACGACGTTTG CTACGGCTGA ATGTGTACTT CGACAACCCC
GTGCCACGCG AGGGCAACTA TGAAGATCGG GGCGGTTATT GGGCGCCGGT TGAGCTCTGG
CACCGCGAGG CTGAACACTG GAGCACGCTG TACCAGAAAG GCATGCGCGT CCTGGTTGAA
GGTCGTACCG TGCGCGATGA GTGGGAGGAC AGCGAAGATA ACGCGCGGGT GACATTCAAG
ATCGAGGCCC GTCGCGTGGG TATCCTGCCT CACCGGTTAA ACGACGTGGT CATGCGCGAG
CGCTCCAGTG AACCGGCGGC CTCTCAAAAT ACAGAGCAGG CCAGTACACC GGCGTCGAAA
CCCAAGAAGC GCAGAGGGTA A
 
Protein sequence
MSTFFVGEGN IGSAPEFQEF PSGNDEPRRL LRLNVYFDNP VPREGNYEDR GGYWAPVELW 
HREAEHWSTL YQKGMRVLVE GRTVRDEWED SEDNARVTFK IEARRVGILP HRLNDVVMRE
RSSEPAASQN TEQASTPASK PKKRRG