Gene Pfl01_2971 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2971 
Symbol 
ID3712342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3409774 
End bp3410442 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content61% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_348702 
Protein GI77459196 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTCC GTATAGGCGT GATTGACAGC GGAGGCCCCT TGATGGACGT CGAGGGCTCT 
CTGGCTTTTC TTCCCGATGG GCGGGTTGAG GCGTGTGTAC CGGATCGCCT GGGCCATGGA
ACGATCGTTG CAAAGGTGAT TCGCCAGAGC TGCCCTCAAG CAATCATTAC CCATGCGCAA
GTGTTCCAGG AGCGGCCAGT AACAACCGCC GCTCAGGTTG CCATGGCGCT TGACTGGTTC
GTCTCGCAGC CAGCTTCCCA TCGAGTGGAC ATTGTTTGCA TGAGCCTGGG ACTTGCTGCT
GATCGCGCGC CTTTGCGTGA GGCCGTCTAT AACGCCGGTG CTGATAAAGT GCTGGTTGTT
GCGGCCAGCC CGGCTCGGGG TAGCACGTGC TATCCGGCGG GTTACGAGAG CGTGATAGGC
GGCACCGGAG ATGCGCGTTG CAAGTGGGAG CAACTCTCGC GCCTGGGACC TCGTTTGTTT
GGCGCCTGGA GTAACTCACC TGAACAGGCC GGGGAGGGCA TGGCGGGAGC CAGCCTGGGC
GCTGCGCGGG TGGCCGGGCA CTTAGCCAAC ATTCTTTTGC GGGAGGGCCG TGCTCTGGCG
TTCCAAGAGG TGCTTTCCCT GATGGGCGAG TGTTGTGAAT ACTTTGGGCC TGAAAGAAGA
ACTGGCTGA
 
Protein sequence
MTVRIGVIDS GGPLMDVEGS LAFLPDGRVE ACVPDRLGHG TIVAKVIRQS CPQAIITHAQ 
VFQERPVTTA AQVAMALDWF VSQPASHRVD IVCMSLGLAA DRAPLREAVY NAGADKVLVV
AASPARGSTC YPAGYESVIG GTGDARCKWE QLSRLGPRLF GAWSNSPEQA GEGMAGASLG
AARVAGHLAN ILLREGRALA FQEVLSLMGE CCEYFGPERR TG