Gene Pfl01_2961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2961 
Symbol 
ID3712371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3398667 
End bp3399593 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content57% 
IMG OID 
Productintradiol ring-cleavage dioxygenase 
Protein accessionYP_348692 
Protein GI77459186 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTGA AGATTTCGCA AACCGCCGAG ATTCAGAAGT TCTTCGAGGA TGCTGCTGGG 
TTGAAAAATG CGGCGGGCAG CGCACGCCTC AAAAGCATCA TCCTGCGAGT GTTGAACGAT
ACCGCGCGGA TAATCGAAGA CCTTGAAATC AGCGAGGATG AGTTCTGGAA AGCGGTGGAT
TATATCAACC GTTTGGGCGG GCGCAGTGAG GCCGGGTTGC TGGTCGCAGG CCTAGGTATT
GAGCACTTCC TGGATTTGCT GCAAGACGCC AAGGATGCGC AGGTAGGGTT GACGGGCGGT
ACGCCACGTA CTATCGAGGG CCCCCTTTAC GTTGCCGGTG CCCCCATAAG CGAAGGCGAA
GTCCGTATGG ACGACGGCAA CGAGGAGGGG CCAGCTACCG TGATGTTCCT TGAAGGCCAA
GTGTTTGATA CGCAGGGTCA TCCACTGGCG GGCGCCACGG TCGATTTGTG GCACGCCAAT
ACCAAGGGCA CGTATTCTTT TTTCGATAAG AGCCAGTCTG AGTACAACTT GCGTCGTCGC
ATCATTACAG ATGCGCAGGG GCGCTACCGT GCGCGCAGTA TCGTGCCCTC CGGCTATGGT
TGCGATCCCC AGGGCCCTAC CCAGGAATGC TTGGACGGGC TCGGTCGTCA CGGCCAGCGA
CCGGCGCATG TTCACTTCTT CATTTCGGCT CCAGGACACA GGCATCTGAC TACTCAGATC
AATCTTTCAG GAGATAAGTA CCTTTGGGAT GACTTTGCAT ACGCCACCCG CGATGGATTG
GTTGGAGAGG TTGAGTTCAA GGAGGATGGC GCACGGGGTG TTTCGGGGCG CTACGCTGAA
CTCAAGTTTA ACTTCCAGCT GCAACACGCT GTTGATCCAA CTGCAGAGCA GCGCAGTCAG
CGCCCACGAG CCCTCCAGGA TGCATAA
 
Protein sequence
MTVKISQTAE IQKFFEDAAG LKNAAGSARL KSIILRVLND TARIIEDLEI SEDEFWKAVD 
YINRLGGRSE AGLLVAGLGI EHFLDLLQDA KDAQVGLTGG TPRTIEGPLY VAGAPISEGE
VRMDDGNEEG PATVMFLEGQ VFDTQGHPLA GATVDLWHAN TKGTYSFFDK SQSEYNLRRR
IITDAQGRYR ARSIVPSGYG CDPQGPTQEC LDGLGRHGQR PAHVHFFISA PGHRHLTTQI
NLSGDKYLWD DFAYATRDGL VGEVEFKEDG ARGVSGRYAE LKFNFQLQHA VDPTAEQRSQ
RPRALQDA