Gene Pfl01_2910 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2910 
Symbol 
ID3712674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3355567 
End bp3356877 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content61% 
IMG OID 
Productgeneral substrate transporter 
Protein accessionYP_348641 
Protein GI77459135 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.255411 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCAGA GCGCCGCTGC CGCCCAGACC ATCGTTGACG ATAAAAATGC CGTCTACAAA 
CGCATCACCC TGCGTTTGAT CCCCTTCATC TTCATCTGCT ACCTGTTCAA CTACCTCGAC
CGGGTCAACG TTGGATTCGC CAAACTGCAG ATGCTCGACG CGCTGAAATT CAGCGAAACC
GTGTACGGCC TCGGTGCCGG GATCTTCTTC ATCGGCTACG TGCTGTGCGG CGTACCGAGC
AACCTGGCGC TGACCAAATT CGGCCCACGG CGCTGGATTG CGCTGATGAT GATCACCTGG
GGCACACTGT CTACCTGCCT GCTGTTCGTC ACCACGCCGA CCGAGTTCTA CACCCTGCGC
CTGTTCACCG GCGCCGCCGA AGCCGGATTC TTCCCAGGTG TTGTGCTGTA TCTCTCGCAG
TGGTTCCCGA CCTTCCGCCG TGGCCGGATC ATGGCGTTGT TCATGTCGGC GATTCCGGTG
TCGGGCCTGC TCGGCAGCCC GTTTTCCGGC TGGATCCTCA ATCACCTCGC CGCCGGCCAG
GGTGGTCTGG CCGGTTGGCA GTGGATGTTC CTGCTGCAAG GCATTCCAAC CGTGGTGCTG
GGCGCACTCG CCTACTTCCT GTTGAGCGAC AACTTCGCCG CTGCCAAATG GCTGACCCCG
CACGAGCGTT CGGTGCTGGA AGCCGATCAG GCAGAGGACC TGGCGAACAA ACCGAAAACC
ACTTCCGATT CGCTGATTGC CGTATTCAAG AACCCGGCCA TCTGGGCCTT CGGCCTGATC
TACTTCTGCA TCCAGAGCGG CGTGTACGCG ATCAACTTCT GGCTGCCGTC GATCATCAAG
AACCTCGGCT TCAGCGACAA CCTGGTGATT GGCTGGTTGA GTGCGATTCC GTATCTGCTG
GCGGCGGTGT TCATGCTGGT AGTTGGTCGC TCGGCGGACT TGCGCAAAGA GCGTCGCTGG
CATCTGGTGG TGCCAATGTT GATGGGCGCT GTCGGCCTGC TGATCGCGGT GAACTTCGCA
GCGAATCCCG CGATTGCGAT CCTCGGCCTG ACCATCGCGA CCATGGGCGC GTTGACCGGT
CTGCCGATGT TCTGGCCGGT GCCGACTGCC ATGCTCAGTG CAGGTGCTGC GGCGGGCGGG
TTGGCGTTGA TCAACTCGAT GGGGCAGATG GCCGGGTTCC TCAGCCCTTA CCTTGTGGGT
TGGGTGAAGG ACAGCACCGG GTCGACCGAC GCGGCGTTGT ATCTGCTGGC GGGTGTGATT
GTTGGCGGGA GTCTGCTGGC GTTGCGGATG ACGCGGACGT TGCGGGCTTA A
 
Protein sequence
MSQSAAAAQT IVDDKNAVYK RITLRLIPFI FICYLFNYLD RVNVGFAKLQ MLDALKFSET 
VYGLGAGIFF IGYVLCGVPS NLALTKFGPR RWIALMMITW GTLSTCLLFV TTPTEFYTLR
LFTGAAEAGF FPGVVLYLSQ WFPTFRRGRI MALFMSAIPV SGLLGSPFSG WILNHLAAGQ
GGLAGWQWMF LLQGIPTVVL GALAYFLLSD NFAAAKWLTP HERSVLEADQ AEDLANKPKT
TSDSLIAVFK NPAIWAFGLI YFCIQSGVYA INFWLPSIIK NLGFSDNLVI GWLSAIPYLL
AAVFMLVVGR SADLRKERRW HLVVPMLMGA VGLLIAVNFA ANPAIAILGL TIATMGALTG
LPMFWPVPTA MLSAGAAAGG LALINSMGQM AGFLSPYLVG WVKDSTGSTD AALYLLAGVI
VGGSLLALRM TRTLRA