Gene Pfl01_2827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2827 
Symbol 
ID3712224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3259682 
End bp3260590 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content58% 
IMG OID 
ProductAraC family transcriptional regulator 
Protein accessionYP_348558 
Protein GI77459052 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACGT GTAATCCGCT ACAGGTTCAA GCGTTCAACA CCGCCGATGT CACCGAACAG 
ATCCGCGCCA CGCCGGGTTG GGTTCAGCAT TACCAGCAGA TGTCGCCGGG GCACTTCGCC
GGGCAGATCC GCTATCTGGA TTTGCAGGGT GTGGAGGTTT ACGAAGAACA GATGAACACT
CGGGTCGAGC AGAATTTCAG TGCGCCGGAA GGGGCGCTGG CATTCTGTTT CGATCGCAGC
GACAACGCGC TCTATCTGCT CAATGAAGAG AGCCGCAACA TCTGGATCAC CCCGGAGAAC
TACCAGGAAA TCGCCGTGGT GTTCGGCCCG GATTTCGTCC AGCGCAATGG CCTGGACGTG
GCCAGGCTGG AAGGTCTGTT CATGGCGCCG CTCAATGGCG CGCAGAATGG ATTGTTCAGC
CGCTGGTTAA GCTCCACTCT CACGAAGTTG TCGCAAACCC TTGATCAGCC AAGCAAAGAA
GCACTGACTC AACAGTTGCT GGAGGACTGC CTGTTCATCC TCGACAACGC GAGCGTGTGC
CTGGACGGCG GTGGCTTGCA GCGGCGCGCC GAAGAGCGAA TCACCCTCAA ACGCGTGGGC
GAGTGGGCAG CGGATTCGCC GGAAGAAACC GTCAATCTGC TTGAGTTATC GCGGGTCGCC
GGGGTTTCCC TGCGCCAGTT GCAGCAGACC TTCAAGGCTT ACACGGGGAT GTCGCCGAGC
CACTGGCTGC GGTTGCGCAG GCTCAACAGT GCGCGGCGCG AATTGCTCAA GCGTTCACCC
GCGGAGACCA CCGTGGCGGA AGTAGCGATG AATTGGTCGT TCTGGCATTT AGGCCGTTTT
TCAAGCAGTT ATCGAGCATT GTTCAAGGAG TTACCGAGCG AGACGTTGAA GCGTTCATCG
TCCTTGTGA
 
Protein sequence
MTTCNPLQVQ AFNTADVTEQ IRATPGWVQH YQQMSPGHFA GQIRYLDLQG VEVYEEQMNT 
RVEQNFSAPE GALAFCFDRS DNALYLLNEE SRNIWITPEN YQEIAVVFGP DFVQRNGLDV
ARLEGLFMAP LNGAQNGLFS RWLSSTLTKL SQTLDQPSKE ALTQQLLEDC LFILDNASVC
LDGGGLQRRA EERITLKRVG EWAADSPEET VNLLELSRVA GVSLRQLQQT FKAYTGMSPS
HWLRLRRLNS ARRELLKRSP AETTVAEVAM NWSFWHLGRF SSSYRALFKE LPSETLKRSS
SL