Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2740 |
Symbol | |
ID | 3714481 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 3157453 |
End bp | 3158115 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_348471 |
Protein GI | 77458965 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.286647 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAACCGA GAAATATTGT GCTGTGCCTT GCCTGTTTCT TGCTGCTTGC CAATGGTCTG ACCTTTGGCA TCAGGTTTCT GAAGAAGAGA AACCTGCTAC TGGCTCTGGA GTGGTTTGTG GTTGCCTTTT CCGCGACAAA CTTCCTGATC TTTTTCCTGA CAGGATCGGA GCATGCGTAC CTGATTTCAT ACTTCTGCGA CGCGTTCTCC AGAGCCTTCG GGATTCCGAT TATTACGGTG CTCGGGCTGA TGGCGGTAAC GCATGCCTAC AAGCCCTCGA TGGGCAAGGA GCTCATGATG TTTGCCGGCG CTCTGCTGGG CACACTCGCG TTGATCTCGA CCAAGGTTCT GGTCACGCTC CTGCCGTATT TCTACGTGCT GATGTGGGTG ATGTTTTCGG TCTACCTGGT GTATTTCGCA GTACGCCTTG CAAATGTCGG AGAGTCGCTA CACGCGATCG GTGTGATGAT TGGCATGCTC GCCTCACTGA CCATTGCGTG CATCTACGAT TTCTACAAGA TCCCCGGCGA CGACAGCAAT GTGCTGCTCA ACTTCTACGT GCTAGCACTG ACGACCTGGG CTTATCTGCT GGTGCACCTG TATTACGCGT ATTGCGCGCT GGAGCGCGCG AAGGGCGCAA TGGCAGTTCT GCAAACGCGC TGA
|
Protein sequence | MEPRNIVLCL ACFLLLANGL TFGIRFLKKR NLLLALEWFV VAFSATNFLI FFLTGSEHAY LISYFCDAFS RAFGIPIITV LGLMAVTHAY KPSMGKELMM FAGALLGTLA LISTKVLVTL LPYFYVLMWV MFSVYLVYFA VRLANVGESL HAIGVMIGML ASLTIACIYD FYKIPGDDSN VLLNFYVLAL TTWAYLLVHL YYAYCALERA KGAMAVLQTR
|
| |