Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2638 |
Symbol | |
ID | 3714279 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 3019892 |
End bp | 3020722 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | binding-protein dependent transport system inner membrane protein |
Protein accession | YP_348369 |
Protein GI | 77458863 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.269935 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCTTC AACAATCCCG CCGGCTGCAA AGCCTGCTGC TCGGCACGCT GGCCTGGGCC ATCGCGATCA TCATTTTCTT CCCGATCTTC TGGATGGTGC TGACCAGTTT CAAGACCGAA ATCGACGCTT TCGCCACCCC GCCGCAGTTC ATCTTCACGC CGACGCTGGA GAACTACCTG CACATCAACG AGCGCAGCGA CTACTTCAGT TTTGCCTGGA ACTCGGTGGT GATTTCCTTC AGCGCCACGG CTCTTTGCCT GCTGATCGCG GTGCCGGCGG CCTACTCGAT GGCGTTCTAC GAAACCCAGC GCACCAAGGG CACGCTGCTA TGGATGCTCT CCACCAAGAT GCTGCCGCCG GTGGGCGTGC TGATGCCGAT CTACCTGCTG GCCAAGAGTT TCGGCCTGCT CGACACGCGC ATCGCGCTGA TCGTGATCTA CACGCTGATC AACCTGCCGA TCGTGGTCTG GATGGTTTAC ACCTACTTCA AGGACATCCC CAAGGACATC CTCGAAGCCG CCCGCCTCGA CGGCGCCACC CTCGCCCAGG AAATGCTCCG CGTGCTGTTG CCGATCGCCA AGGGCGGCCT GGCTTCGACC GTACTGCTCT CGCTGATCCT GTGCTGGAAC GAGGCGTTCT GGTCGTTGAA CCTGACCTCG TCCAAAGCCG CGCCACTGAC CGCGTTGATC GCTTCCTACT CAAGCCCCGA AGGCTTGTTC TGGGCCAAGT TGTCGGCCGT CTCGACCCTG GCCTGCGCGC CGATCCTGAT CTTCGGCTGG ATCAGCCAGA AACAACTGGT GCGCGGCCTG TCGTTCGGTG CCGTGAAATA A
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Protein sequence | MTLQQSRRLQ SLLLGTLAWA IAIIIFFPIF WMVLTSFKTE IDAFATPPQF IFTPTLENYL HINERSDYFS FAWNSVVISF SATALCLLIA VPAAYSMAFY ETQRTKGTLL WMLSTKMLPP VGVLMPIYLL AKSFGLLDTR IALIVIYTLI NLPIVVWMVY TYFKDIPKDI LEAARLDGAT LAQEMLRVLL PIAKGGLAST VLLSLILCWN EAFWSLNLTS SKAAPLTALI ASYSSPEGLF WAKLSAVSTL ACAPILIFGW ISQKQLVRGL SFGAVK
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