Gene Pfl01_2638 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2638 
Symbol 
ID3714279 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3019892 
End bp3020722 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content61% 
IMG OID 
Productbinding-protein dependent transport system inner membrane protein 
Protein accessionYP_348369 
Protein GI77458863 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.269935 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCTTC AACAATCCCG CCGGCTGCAA AGCCTGCTGC TCGGCACGCT GGCCTGGGCC 
ATCGCGATCA TCATTTTCTT CCCGATCTTC TGGATGGTGC TGACCAGTTT CAAGACCGAA
ATCGACGCTT TCGCCACCCC GCCGCAGTTC ATCTTCACGC CGACGCTGGA GAACTACCTG
CACATCAACG AGCGCAGCGA CTACTTCAGT TTTGCCTGGA ACTCGGTGGT GATTTCCTTC
AGCGCCACGG CTCTTTGCCT GCTGATCGCG GTGCCGGCGG CCTACTCGAT GGCGTTCTAC
GAAACCCAGC GCACCAAGGG CACGCTGCTA TGGATGCTCT CCACCAAGAT GCTGCCGCCG
GTGGGCGTGC TGATGCCGAT CTACCTGCTG GCCAAGAGTT TCGGCCTGCT CGACACGCGC
ATCGCGCTGA TCGTGATCTA CACGCTGATC AACCTGCCGA TCGTGGTCTG GATGGTTTAC
ACCTACTTCA AGGACATCCC CAAGGACATC CTCGAAGCCG CCCGCCTCGA CGGCGCCACC
CTCGCCCAGG AAATGCTCCG CGTGCTGTTG CCGATCGCCA AGGGCGGCCT GGCTTCGACC
GTACTGCTCT CGCTGATCCT GTGCTGGAAC GAGGCGTTCT GGTCGTTGAA CCTGACCTCG
TCCAAAGCCG CGCCACTGAC CGCGTTGATC GCTTCCTACT CAAGCCCCGA AGGCTTGTTC
TGGGCCAAGT TGTCGGCCGT CTCGACCCTG GCCTGCGCGC CGATCCTGAT CTTCGGCTGG
ATCAGCCAGA AACAACTGGT GCGCGGCCTG TCGTTCGGTG CCGTGAAATA A
 
Protein sequence
MTLQQSRRLQ SLLLGTLAWA IAIIIFFPIF WMVLTSFKTE IDAFATPPQF IFTPTLENYL 
HINERSDYFS FAWNSVVISF SATALCLLIA VPAAYSMAFY ETQRTKGTLL WMLSTKMLPP
VGVLMPIYLL AKSFGLLDTR IALIVIYTLI NLPIVVWMVY TYFKDIPKDI LEAARLDGAT
LAQEMLRVLL PIAKGGLAST VLLSLILCWN EAFWSLNLTS SKAAPLTALI ASYSSPEGLF
WAKLSAVSTL ACAPILIFGW ISQKQLVRGL SFGAVK