Gene Pfl01_2543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2543 
Symbol 
ID3714086 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2909000 
End bp2909998 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content67% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_348274 
Protein GI77458768 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.730703 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTTGT CCGCCTATCT CTCACGGCAC GCCAGGGACT ACCGCGACAC GGCTGCTCTT 
GGTCTGTGTC TGCGGCAAAT GGTCGAAGCC GGCCTCGACC GTCTGCCACT GCCCGGCAGC
GGTCGTACGC TGGAGCGCTG GCAACGGCTG TCCGAGGTCG GCGGGCATGA TCTGGGGCTG
TGCAAACTCT ACGAAGGCCA TACCGATGCC TTGGCGATCA TCGAGCAACT CGGTGGCTCG
CCGACGCCCG GCAGTACGTG GGGCATGTGG GCGGCCGAAC CACCGCAGGC GCGGGTTCGG
GTCAGCCGTT CGGGGCAACT GGTGCGGTTG AACGGGCGCA AGGCCTGGTG TTCCGGGGCG
GCGGTGCTCA GTCACGCCCT GCTCACGGCA TGGGATGAGG ACGATCGTCA GCAACTGGTG
GCCGTGGCCC TCGATCAACC GGGCGTCAGC GTGACCGATC AAGGCTGGCA AGCGGTCGGC
ATGGCGGCCA CCGGCAGCGT CGAGGTGCTG TTCGATGAAG TCGAGGCCCA GGCGATTGGT
GAACCCGGCG ACTACCTGCA ACGGCCGGGT TTCTGGCACG GCGGAATCGG AATCGCCGCG
TGCTGGTACG GCGCCGCGAG GGAGATTGGC GAACGCTTGC GCCTGCACTG TGCGCGGCGT
GAAGAACCCC ACGCGCTGGC CAGTCTCGGC GCCGTCGACA GTGCCTTGCA CGCCGCCGCC
CAAGTGCTGC GTGTCAGTGC CCTGGACATC GACAGCAATC CCCACACCAA CGCCGAATTG
CTGGCTCGCC GCGTACGGGC CGTGGTCGAG GACGCCGCTG AACAGGTGAT CCGCGAGACC
GGTCGGGCAC TTGGGGCCGG GCCGTTCTGC AAGGATCCGC ACTTCGCCCG GCTGGTGGCC
GATTTGCCGG TGTATCTGCG TCAGAGCCAC GCTGAACGCG ATCTGGCAGC ACTGGGCCGA
TTGATTGCGC AGCACGCACG CGAGGGTTGG GCCCTATGA
 
Protein sequence
MDLSAYLSRH ARDYRDTAAL GLCLRQMVEA GLDRLPLPGS GRTLERWQRL SEVGGHDLGL 
CKLYEGHTDA LAIIEQLGGS PTPGSTWGMW AAEPPQARVR VSRSGQLVRL NGRKAWCSGA
AVLSHALLTA WDEDDRQQLV AVALDQPGVS VTDQGWQAVG MAATGSVEVL FDEVEAQAIG
EPGDYLQRPG FWHGGIGIAA CWYGAAREIG ERLRLHCARR EEPHALASLG AVDSALHAAA
QVLRVSALDI DSNPHTNAEL LARRVRAVVE DAAEQVIRET GRALGAGPFC KDPHFARLVA
DLPVYLRQSH AERDLAALGR LIAQHAREGW AL