Gene Pfl01_2526 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2526 
Symbol 
ID3712099 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2889380 
End bp2890126 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content62% 
IMG OID 
ProductShort-chain dehydrogenase/reductase SDR 
Protein accessionYP_348257 
Protein GI77458751 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAAAG TCATTGTGAT CACCGGCGGT GGTCGTGGAA TTGGCGCCGC CACCGCGCTG 
TTGGCTGCCG AGCAAGGCTA TCGGATCTGC ATCAATTACC AGACGGACGA ACAGGCCGCT
CACCACGTGC TCGACCAGGT CCGTGAACGC GGCGCCACGG CCATCGCCGT GCGCGCCGAT
GTCAGTATCG AAGACGAAGT GATCGCGCTG TTCAACCGAG TCGACAGCGA ACTGGGCCGC
GTCACCGCCT TGGTGAACAA CGCCGGCACC GTCGGGCACA AGTCGCGGGT CGACGAAATG
TCCGAATTCC GCATCCTCAA AATCATGAAA ACCAACGTCC TGGCGCCGAT CCTCTGCGCC
AAGCACGCGA TCCTGCGCAT GTCGCCCAAA CACGGCGGGC AGGGCGGCAG CATCGTCAAC
GTTTCTTCGG TCGCTGCGCG GCTGGGATCG CCCAATGAAT ACGTTGATTA CGCGGCCTCA
AAAGGTGCGC TGGATACGTT CACCATCGGT CTGTCCAAGG AAGTGGCGGG CGAAGGGATT
CGGGTGAATG CGGTGCGTCC GGGTTACATC TATACCGATT TCCACGCGTT GAGTGGCGAC
CCCGATCGGG TCAGCAAGCT GGAGTCGGCG ATCCCGATGG CCCGGGGCGG GCGGCCGGAC
GAAGTGGCGG AGGCAATTGT CTGGTTGCTG TCGGACAAAG CCTCGTATGC CACCGGGACT
TTTGTCGATC TCGGCGGCGG ACGTTAG
 
Protein sequence
MDKVIVITGG GRGIGAATAL LAAEQGYRIC INYQTDEQAA HHVLDQVRER GATAIAVRAD 
VSIEDEVIAL FNRVDSELGR VTALVNNAGT VGHKSRVDEM SEFRILKIMK TNVLAPILCA
KHAILRMSPK HGGQGGSIVN VSSVAARLGS PNEYVDYAAS KGALDTFTIG LSKEVAGEGI
RVNAVRPGYI YTDFHALSGD PDRVSKLESA IPMARGGRPD EVAEAIVWLL SDKASYATGT
FVDLGGGR