Gene Pfl01_2390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2390 
Symbol 
ID3715442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2749783 
End bp2750478 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content64% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_348122 
Protein GI77458617 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.351246 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000408238 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGAACGAAC AGACATTGTC CATGCGCCTG GAGCGGGTGG CGGCGCACGT GCCCGCCGAT 
GCGCGGCTGG CCGATATCGG CTCGGATCAC GGTTACCTGC CGGTGGCCCT GATGCGCCGT
GGCGCGATCG CGGCGGCGGT GGCGGGCGAG ATGGCCGAGA CGCCGTTCCG TTCGGCGCAA
CGCACCGTGC GCGGAAACGA TCTTGAGCAG CAGATTACCG TACGCCTGGC CAATGGCTTG
ATGGCCGTCG AACCGGAAGA CGGGATCACG GAAATTACCG TGTGTGGCAT GGGCGGCGAA
ACCATCCGCG ACATTCTCGA AGCCGGCAAG GCGCGTCTCA GCGGCCGCGA GCGTCTGATC
CTGCAACCCA ACGGCGGCGA ACAACCGCTG CGCCAATGGC TGATGGACAA CGACTACCGA
ATCCTCTGCG AAGAAGTCCT GCGCGAGAAC CGCTTCGACT ACGAAATCAT CGTGGCCGAG
CGGGGCGGGC CGGTTTCCTA TACCGCCGAG GAACTGTACT TCGGGCCGCT GCAGTTGCAG
GCACGCAGTC CGGCGTTTGT CTCAAAGTGG CAGCACCGGT TGCGGCACAA GCAGCAGACA
CTGGCTCATT TCGGGCGGGC ACGGCATGCC GTTTGCGAGC GCAAGGTGCA GGATCTGACG
CAGCAAGTGC GCTGGATCAC TGACGTGCTG GGGTGA
 
Protein sequence
MNEQTLSMRL ERVAAHVPAD ARLADIGSDH GYLPVALMRR GAIAAAVAGE MAETPFRSAQ 
RTVRGNDLEQ QITVRLANGL MAVEPEDGIT EITVCGMGGE TIRDILEAGK ARLSGRERLI
LQPNGGEQPL RQWLMDNDYR ILCEEVLREN RFDYEIIVAE RGGPVSYTAE ELYFGPLQLQ
ARSPAFVSKW QHRLRHKQQT LAHFGRARHA VCERKVQDLT QQVRWITDVL G