Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2362 |
Symbol | |
ID | 3715453 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 2720489 |
End bp | 2721394 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | LysR family transcriptional regulator |
Protein accession | YP_348094 |
Protein GI | 77458589 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.110517 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAATCGT TCGTCATGGT GGTCGACACC GGCAGTATCA CCGAGGCAGC CCGGCAACTG GGCACCGCCA AATCCATGGT CAGCCAGCGG ATTGCGCAAC TGGAAAAACG ACTCGGCAGC ATCGTCCTCG AACGCGGGCG GCAGGCCCGG CTGACGGAGG CCGGGGAGGT GTTTTATCGG TATTGCGTGC GGATTCTGTC GGAGGTCGAA GAGGCGGAAG ACGCGGTGCT GGCCTTTCAA TCGAGCCTGC GCGGCAGCCT GCGGCTGGCG GCGCCGATGG CGTTCAGCAT TCGTTACCTG ACGCCGATCC TGTCGTCCTT CGCGGTACGC TATCCCGAGT TGCGCCTGGA CATCGAATTC GACGATCGCC ACGTCAACCT ACACGAAGAA CGCTACGACG CGGCGATCCG CATCGGTGAG TTGCCGGACT CCTCGCTGGT GGCGAAAACC ATCACCGCCA ATCGTCATAT CATTTGCGCC AGTCCCGACT ATCTGGCCGC TCATGGCACG CCGCAAACCC CGCAAGAACT GTCTGAACAT TTCGCCATGC TCTACGTGAA CCGCGAACCC CACGGCATGT GGACGCTGCC GGTGAACAAT GCGCTGGAAT CGTTTCGTGT GCGCTGCCGG ATGCGCACCA ACAACGGCCA TCAGTTGATG GAGGCGGCGA AGGCCGGTAT GGGGCTGGCG ATTCTGCCGA CGTTTCTGGC GGCGCAAGCT ATCGTGGACG GTGAACTTCA GGAGGTGTTG GCGCCTTACG CGCCCCGAGG CGGGAATATT TCGGCGGTGT ACCGACGCTC CCAGCGGGCT TCACCCAAGT TGCAGGCGTT GACCGATTTT CTCTGCGAAC AGATCGGCAA TCCGCCGGTG TGGGAGCAAT TGCTCGGGGC TCATTCGGCC GGTTAA
|
Protein sequence | MQSFVMVVDT GSITEAARQL GTAKSMVSQR IAQLEKRLGS IVLERGRQAR LTEAGEVFYR YCVRILSEVE EAEDAVLAFQ SSLRGSLRLA APMAFSIRYL TPILSSFAVR YPELRLDIEF DDRHVNLHEE RYDAAIRIGE LPDSSLVAKT ITANRHIICA SPDYLAAHGT PQTPQELSEH FAMLYVNREP HGMWTLPVNN ALESFRVRCR MRTNNGHQLM EAAKAGMGLA ILPTFLAAQA IVDGELQEVL APYAPRGGNI SAVYRRSQRA SPKLQALTDF LCEQIGNPPV WEQLLGAHSA G
|
| |